RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TCP11X2Q5H9J9 407 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 CTR9Q6PD62 1173 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 NUP88Q99567 741 aaPredicted RBP21.54■■□□□ 1.04
SCARF1-206ENST00000573852 TUBB2BQ9BVA1 445 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 BRIP1Q9BX63 1249 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
SCARF1-206ENST00000573852 CAMTA2O94983 1202 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 NELFBQ8WX92 580 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 MAPK8IP1Q9UQF2 711 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 KCNJ18B7U540 433 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 DDAH1O94760 285 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 KCNJ12Q14500 433 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 CYP26C1Q6V0L0 522 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 ZBTB9Q96C00 473 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 NAPGQ99747 312 aaPredicted RBP21.53■■□□□ 1.04
SCARF1-206ENST00000573852 SLF1Q9BQI6 1058 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 ADAM21Q9UKJ8 722 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 USP17L12C9JPN9 530 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 USP17L21D6R901 530 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 MCM6Q14566 821 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 ABCB6Q9NP58 842 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 CCDC87Q9NVE4 849 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 NIP7Q9Y221 180 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCARF1-206ENST00000573852 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 MYH13Q9UKX3 1938 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 PHLPP1O60346 1717 aa21.53■■□□□ 1.04
SCARF1-206ENST00000573852 POTEB2H3BUK9 544 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 RHOXF2BP0C7M4 288 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 KRT9P35527 623 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 NLRP5P59047 1200 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 IRX5P78411 483 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-206ENST00000573852 PARP10Q53GL7 1025 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 RHOXF2Q9BQY4 288 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 PDE11AQ9HCR9 933 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 GDAQ9Y2T3 454 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
SCARF1-206ENST00000573852 GPS2Q13227 327 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 ZNF658Q5TYW1 1059 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-206ENST00000573852 BBXQ8WY36 941 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-206ENST00000573852 CHP1Q99653 195 aa21.52■■□□□ 1.04
SCARF1-206ENST00000573852 EXOC5O00471 708 aa21.52■■□□□ 1.03
SCARF1-206ENST00000573852 RPN1P04843 607 aaKnown RBP21.52■■□□□ 1.03
SCARF1-206ENST00000573852 SCG2P13521 617 aa21.52■■□□□ 1.03
SCARF1-206ENST00000573852 SPAG1Q07617 926 aa21.52■■□□□ 1.03
SCARF1-206ENST00000573852 L1RE1Q9UN81 338 aa21.52■■□□□ 1.03
SCARF1-206ENST00000573852 PRCPP42785 496 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 FAM47AQ5JRC9 791 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 HDXQ7Z353 690 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 CTCFLQ8NI51 663 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-206ENST00000573852 GNL3LQ9NVN8 582 aaKnown RBP21.51■■□□□ 1.03
SCARF1-206ENST00000573852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.51■■□□□ 1.03
SCARF1-206ENST00000573852 TULP2O00295 520 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 VSNL1P62760 191 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 IRF2BP1Q8IU81 584 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
SCARF1-206ENST00000573852 REXO2Q9Y3B8 237 aaKnown RBP21.51■■□□□ 1.03
SCARF1-206ENST00000573852 TRAPPC10P48553 1259 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 UBXN1Q04323 297 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 WHAMMP3Q1A5X7 153 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 CTAGE15A4D2H0 777 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 CTAGE8P0CG41 777 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 TRIM14Q14142 442 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 CTAGE6Q86UF2 777 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 CTAGE4Q8IX94 777 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 C4orf32Q8N8J7 132 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 NOA1Q8NC60 698 aaKnown RBP21.5■■□□□ 1.03
SCARF1-206ENST00000573852 EXOC4Q96A65 974 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 MYO1AQ9UBC5 1043 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 TRIM10Q9UDY6 481 aa21.5■■□□□ 1.03
SCARF1-206ENST00000573852 PCP11498 1178 aaKnown RBP21.49■■□□□ 1.03
SCARF1-206ENST00000573852 AMPD2Q01433 879 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 ANKRD20A12PQ8NF67 263 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 TRIM49BA6NDI0 452 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 ERLIN1O75477 346 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 TUBB4BP68371 445 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-206ENST00000573852 PYM1Q9BRP8 204 aaKnown RBP21.49■■□□□ 1.03
SCARF1-206ENST00000573852 MYO6Q9UM54 1294 aa21.49■■□□□ 1.03
SCARF1-206ENST00000573852 EPN1Q9Y6I3 576 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-206ENST00000573852 TAF1P21675 1872 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 N4BP1O75113 896 aaKnown RBP21.48■■□□□ 1.03
SCARF1-206ENST00000573852 GTF2E1P29083 439 aaPredicted RBP21.48■■□□□ 1.03
SCARF1-206ENST00000573852 MUM1L1Q5H9M0 696 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 NCAPH2Q6IBW4 605 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 C3orf67Q6ZVT6 689 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 RMND1Q9NWS8 449 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 TTC26A0AVF1 554 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 PARP1P09874 1014 aaKnown RBP21.48■■□□□ 1.03
SCARF1-206ENST00000573852 CAPN2P17655 700 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 ATP6V1AP38606 617 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 PSD3Q9NYI0 1048 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
SCARF1-206ENST00000573852 A0A0G2JS52 829 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 ORC4O43929 436 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 NDUFA10O95299 355 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 LMAN1P49257 510 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms