RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 STK11IPQ8N1F8 1099 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 MKL1Q969V6 931 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 CABP5Q9NP86 173 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 MTMR4Q9NYA4 1195 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 MYPNQ86TC9 1320 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 MPHOSPH10O00566 681 aaKnown RBP10.34□□□□□ -0.75
SMG6-210ENST00000572205 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
SMG6-210ENST00000572205 NMT2O60551 498 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 NDUFB10O96000 172 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 GNRH1P01148 92 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 ERVK-24P63145 666 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 SMCR8Q8TEV9 937 aaPredicted RBP10.34□□□□□ -0.75
SMG6-210ENST00000572205 LPAR1Q92633 364 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 SHISA4Q96DD7 197 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 FEZ1Q99689 392 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 DSCC1Q9BVC3 393 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 KANSL2Q9H9L4 492 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 TMOD4Q9NZQ9 345 aa10.34□□□□□ -0.75
SMG6-210ENST00000572205 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 SGSM2O43147 1006 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 SOX10P56693 466 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 IRX3P78415 501 aaPredicted RBP10.33□□□□□ -0.76
SMG6-210ENST00000572205 PTH1RQ03431 593 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 PABPC4Q13310 644 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMG6-210ENST00000572205 IRF5Q13568 498 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 MORN1Q5T089 497 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
SMG6-210ENST00000572205 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 SH3TC2Q8TF17 1288 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 ATG4CQ96DT6 458 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
SMG6-210ENST00000572205 NACAP1Q9BZK3 213 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
SMG6-210ENST00000572205 SYNPO2Q9UMS6 1093 aa10.33□□□□□ -0.76
SMG6-210ENST00000572205 APPP05067 770 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 FLT3LGP49771 235 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 PRMT2P55345 433 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 FCGRTP55899 365 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 HAND2P61296 217 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 AMOTL1Q8IY63 956 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 RABGAP1Q9Y3P9 1069 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
SMG6-210ENST00000572205 LAMA3Q16787 3333 aa10.32□□□□□ -0.76
SMG6-210ENST00000572205 CEP290O15078 2479 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 TFAP4Q01664 338 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 PDE4BQ07343 736 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 MTFR1Q15390 333 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 BMP2KLQ5H9B9 411 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 FAM83BQ5T0W9 1011 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 MAP3K21Q5TCX8 1036 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 GPR142Q7Z601 462 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
SMG6-210ENST00000572205 TRIB2Q92519 343 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
SMG6-210ENST00000572205 F5H6K3 240 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 HIP1O00291 1037 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 TNPO2O14787 897 aaKnown RBP10.3□□□□□ -0.76
SMG6-210ENST00000572205 MAP3K13O43283 966 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
SMG6-210ENST00000572205 TTLL1O95922 423 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 CYP21A2P08686 494 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 ELNP15502 786 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 KLRC3Q07444 240 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 TRIM32Q13049 653 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 GRB14Q14449 540 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 MOV10L1Q9BXT6 1211 aaKnown RBP10.3□□□□□ -0.76
SMG6-210ENST00000572205 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 LSG1Q9H089 658 aaKnown RBP10.3□□□□□ -0.76
SMG6-210ENST00000572205 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
SMG6-210ENST00000572205 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms