RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 CAPN2P17655 700 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 GNAT2P19087 354 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 RGS2P41220 211 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 TDO2P48775 406 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 TRIB2Q92519 343 aa14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 RNF166Q96A37 237 aaPredicted RBP14.8□□□□□ -0.04
CTDNEP1-205ENST00000570828 GSG1L2A8MUP6 293 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 TULP1O00294 542 aaPredicted RBP14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 APPP05067 770 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 SBK1Q52WX2 424 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 MORN1Q5T089 497 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 SPICE1Q8N0Z3 855 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 APBA2Q99767 749 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 HTATIP2Q9BUP3 242 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 VCPKMTQ9H867 229 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 KANSL2Q9H9L4 492 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 HMX1Q9NP08 348 aaPredicted RBP14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 TMX2Q9Y320 296 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 IVNS1ABPQ9Y6Y0 642 aa14.79□□□□□ -0.04
CTDNEP1-205ENST00000570828 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 RPTORQ8N122 1335 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 MINDY4BA8MYZ0 360 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 M0R2C6 588 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 FLOT1O75955 427 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 SLC34A2O95436 690 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 TRIM32Q13049 653 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 HDAC1Q13547 482 aaPredicted RBP14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 COG2Q14746 738 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 ANKRD45Q5TZF3 282 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 UBE2Q1Q7Z7E8 422 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 DPF3Q92784 378 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 HOXC10Q9NYD6 342 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 MYH7P12883 1935 aa14.78□□□□□ -0.04
CTDNEP1-205ENST00000570828 WDR46O15213 610 aaKnown RBP14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 EEF2P13639 858 aaKnown RBP14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 MAP2K5Q13163 448 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 AAMPQ13685 434 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 SIAH1Q8IUQ4 282 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 STK11IPQ8N1F8 1099 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 MB21D1Q8N884 522 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 USP6NLQ92738 828 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 NACAP1Q9BZK3 213 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 CRISPLD2Q9H0B8 497 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 ZNF287Q9HBT7 754 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 EPB41L4AQ9HCS5 686 aaPredicted RBP14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
CTDNEP1-205ENST00000570828 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 SLC15A5A6NIM6 579 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 RAD21O60216 631 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 RASA1P20936 1047 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 PTPREP23469 700 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 VARS2Q5ST30 1063 aaKnown RBP14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 MAP3K21Q5TCX8 1036 aa14.76□□□□□ -0.05
CTDNEP1-205ENST00000570828 BAZ2AQ9UIF9 1905 aaKnown RBP14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 H0YGN5 161 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 GRB14Q14449 540 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 PLS1Q14651 629 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 CCL14Q16627 93 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 ATG4CQ96DT6 458 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 MOV10L1Q9BXT6 1211 aaKnown RBP14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 SPATC1LQ9H0A9 340 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 NAPBQ9H115 298 aa14.75□□□□□ -0.05
CTDNEP1-205ENST00000570828 SLC3A2P08195 630 aaKnown RBP14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 CACNB2Q08289 660 aaPredicted RBP14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 NECAB2Q7Z6G3 386 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 IFNL3Q8IZI9 196 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 ZNF444Q8N0Y2 327 aaPredicted RBP14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 ANKLE1Q8NAG6 615 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 SHCBP1Q8NEM2 672 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 EVI5LQ96CN4 794 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 NR2E3Q9Y5X4 410 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 CEP290O15078 2479 aa14.74□□□□□ -0.05
CTDNEP1-205ENST00000570828 PRDM1O75626 825 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 HOXC6P09630 235 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 ERCC3P19447 782 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 PDE1AP54750 535 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 DIS3LQ8TF46 1054 aaKnown RBP14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 PAWRQ96IZ0 340 aaKnown RBP14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 DOCK3Q8IZD9 2030 aa14.73□□□□□ -0.05
CTDNEP1-205ENST00000570828 PLXNB2O15031 1838 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 STRNO43815 780 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 ADORA2AP29274 412 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 PDE4BQ07343 736 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 HABP4Q5JVS0 413 aaKnown RBP14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 FAM83BQ5T0W9 1011 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 DPP9Q86TI2 863 aa14.72□□□□□ -0.05
CTDNEP1-205ENST00000570828 NCAPG2Q86XI2 1143 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms