RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 KDM6AO15550 1401 aaPredicted RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 SPDYE3A6NKU9 549 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 PHKG2P15735 406 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 TRIM28Q13263 835 aaKnown RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 ITPK1Q13572 414 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 SMIM5Q71RC9 77 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 MAP4K3Q8IVH8 894 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 TRIM56Q9BRZ2 755 aaKnown RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 SOX17Q9H6I2 414 aaPredicted RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 SRA1Q9HD15 236 aaKnown RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 OSGEPQ9NPF4 335 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 NOP53Q9NZM5 478 aaKnown RBP7.61□□□□□ -1.19
GDE1-204ENST00000569773 ARFGEF1Q9Y6D6 1849 aa7.61□□□□□ -1.19
GDE1-204ENST00000569773 PCNTO95613 3336 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 SCAMP3O14828 347 aaKnown RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 TM4SF5O14894 197 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 PPM1GO15355 546 aaPredicted RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 DDX3YO15523 660 aaKnown RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 PAGE1O75459 146 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 HSPA5P11021 654 aaKnown RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 NLRP12P59046 1061 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 PPP2R3AQ06190 1150 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 GPR162Q16538 588 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 FOXD4L6Q3SYB3 417 aaPredicted RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 FOXD4L3Q6VB84 417 aaPredicted RBP7.6□□□□□ -1.19
GDE1-204ENST00000569773 SV2BQ7L1I2 683 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 FBXO11Q86XK2 927 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 KLHL23Q8NBE8 558 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 FLAD1Q8NFF5 587 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 ASAP1Q9ULH1 1129 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 CD2APQ9Y5K6 639 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 UBR2Q8IWV8 1755 aa7.6□□□□□ -1.19
GDE1-204ENST00000569773 ADCY9O60503 1353 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 SIPA1L3O60292 1781 aaPredicted RBP7.59□□□□□ -1.19
GDE1-204ENST00000569773 ADAM11O75078 769 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 COL8A1P27658 744 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 CD68P34810 354 aaPredicted RBP7.59□□□□□ -1.19
GDE1-204ENST00000569773 ZNF76P36508 570 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 FANCCQ00597 558 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 MAP3K11Q16584 847 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 PRRT3Q5FWE3 981 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 IFNL2Q8IZJ0 200 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 PANK3Q9H999 370 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 KCNK4Q9NYG8 393 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 SBF1O95248 1867 aa7.59□□□□□ -1.19
GDE1-204ENST00000569773 AFDNP55196 1824 aaKnown RBP7.59□□□□□ -1.19
GDE1-204ENST00000569773 F6X3S4 739 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 DLL1O00548 723 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 TCF3P15923 654 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 HSPA6P17066 643 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 HMGB2P26583 209 aaKnown RBP7.58□□□□□ -1.2
GDE1-204ENST00000569773 C9orf131Q5VYM1 1079 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 SULF2Q8IWU5 870 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 STK35Q8TDR2 534 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 NOC4LQ9BVI4 516 aaKnown RBP7.58□□□□□ -1.2
GDE1-204ENST00000569773 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
GDE1-204ENST00000569773 TMOD3Q9NYL9 352 aa7.58□□□□□ -1.2
GDE1-204ENST00000569773 MRC1P22897 1456 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 ERVV-2B6SEH9 535 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 ELNP15502 786 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 NME2P22392 152 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 TNNT2P45379 298 aaPredicted RBP7.57□□□□□ -1.2
GDE1-204ENST00000569773 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
GDE1-204ENST00000569773 GRIK4Q16099 956 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 HS2ST1Q7LGA3 356 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 RNF34Q969K3 372 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 USP26Q9BXU7 913 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 NRSN2Q9GZP1 204 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 NRXN2Q9P2S2 1712 aa7.57□□□□□ -1.2
GDE1-204ENST00000569773 DLEC1Q9Y238 1755 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 PXDNLA1KZ92 1463 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 C10orf71Q711Q0 1435 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 ATP10DQ9P241 1426 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 GRIN3BO60391 1043 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 ECEL1O95672 775 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 CYP11A1P05108 521 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 LIG3P49916 1009 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 POU4F3Q15319 338 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 RASIP1Q5U651 963 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 TTBK2Q6IQ55 1244 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 SHISA2Q6UWI4 295 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 UBASH3BQ8TF42 649 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 CBX8Q9HC52 389 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
GDE1-204ENST00000569773 COL3A1P02461 1466 aaPredicted RBP7.55□□□□□ -1.2
GDE1-204ENST00000569773 CCDC88AQ3V6T2 1871 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 WISP1O95388 367 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 CTSBP07858 339 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 SPATA31C1P0DKV0 1188 aa7.55□□□□□ -1.2
GDE1-204ENST00000569773 BMP6P22004 513 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms