RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 ATG4CQ96DT6 458 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
SHCBP1-207ENST00000569702 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 A0A0G2JMZ2 1700 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 GRK4P32298 578 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 CCNA1P78396 465 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 PTH1RQ03431 593 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 GPR142Q7Z601 462 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 USP6NLQ92738 828 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 NEDD4P46934 1319 aa13.09□□□□□ -0.31
SHCBP1-207ENST00000569702 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 RAD21O60216 631 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 ADCY3O60266 1144 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 SOX10P56693 466 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 MORN1Q5T089 497 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 REPS2Q8NFH8 660 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 SOCS4Q8WXH5 440 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 ESR2Q92731 530 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 TTC14Q96N46 770 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 MOV10L1Q9BXT6 1211 aaKnown RBP13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 SPATC1LQ9H0A9 340 aa13.08□□□□□ -0.32
SHCBP1-207ENST00000569702 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 VWA5AO00534 786 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 BMP3P12645 472 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 XRCC5P13010 732 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 PLEKHH3Q7Z736 793 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 ZNF214Q9UL59 606 aaPredicted RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
SHCBP1-207ENST00000569702 PLA2G6O60733 806 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 CYP21A2P08686 494 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 TOP1P11387 765 aaKnown RBP13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 ELNP15502 786 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 PTPREP23469 700 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 MCCP23508 829 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 ESYT1Q9BSJ8 1104 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
SHCBP1-207ENST00000569702 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 B4E1Z4 1266 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 KDM4AO75164 1064 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 ERCC3P19447 782 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 SLC1A4P43007 532 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 GRB14Q14449 540 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 MTFR1Q15390 333 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 RIOX2Q8IUF8 465 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 KRT23Q9C075 422 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 MROH8Q9H579 483 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 SLC38A10Q9HBR0 1119 aa13.05□□□□□ -0.32
SHCBP1-207ENST00000569702 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 STRNO43815 780 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 SLC25A27O95847 323 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 INHAP05111 366 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 HOXC6P09630 235 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 CYP2B6P20813 491 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 STAT3P40763 770 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 RGS2P41220 211 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 STAT2P52630 851 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 UBXN2AP68543 259 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 MAP2K5Q13163 448 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 PLS1Q14651 629 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 CHURC1Q8WUH1 139 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 DCAF4Q8WV16 495 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms