RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LUZP1Q86V48 1076 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 DHX40Q8IX18 779 aaKnown RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 ZNF444Q8N0Y2 327 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 STK11IPQ8N1F8 1099 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 NEDD1Q8NHV4 660 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 CTCFLQ8NI51 663 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 SHISA4Q96DD7 197 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 MRFAP1L1Q96HT8 127 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 SPTLC3Q9NUV7 552 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 FBXO2Q9UK22 296 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 KCNJ14Q9UNX9 436 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 TRIM75PA6NK02 468 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 TSPY2A6NKD2 308 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 SMTNL1A8MU46 457 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 C6orf229H3BNL8 230 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 IKBKBO14920 756 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 PLEKHA8P1O95397 391 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 SCG2P13521 617 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 RASA1P20936 1047 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 CALML3P27482 149 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 RFC5P40937 340 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 BTDP43251 543 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 CDK8P49336 464 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 SARSP49591 514 aaKnown RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 PLCD1P51178 756 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 HDLBPQ00341 1268 aaKnown RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 KIAA2012Q0VF49 1180 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 DIXDC1Q155Q3 683 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 FAM47AQ5JRC9 791 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MFSD14BQ5SR56 506 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 NT5DC1Q5TFE4 455 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MSL1Q68DK7 614 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 KANK3Q6NY19 840 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 HHIPL2Q6UWX4 724 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 KRBA2Q6ZNG9 492 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 C16orf86Q6ZW13 317 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 CEP57L1Q8IYX8 460 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 CMTR1Q8N1G2 835 aaKnown RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MPNDQ8N594 471 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 BANK1Q8NDB2 785 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 TGFBRAP1Q8WUH2 860 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 PIBF1Q8WXW3 757 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 FERMT2Q96AC1 680 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MASTLQ96GX5 879 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 ZC3H12CQ9C0D7 883 aaKnown RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 KAT14Q9H8E8 782 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MKNK2Q9HBH9 465 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 CABP5Q9NP86 173 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 FAM13BQ9NYF5 915 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 HOOK1Q9UJC3 728 aaKnown RBP6.17□□□□□ -1.42
SF3B3-213ENST00000569687 PARP3Q9Y6F1 533 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 DUOX1Q9NRD9 1551 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 MYH15Q9Y2K3 1946 aa6.17□□□□□ -1.42
SF3B3-213ENST00000569687 KIAA1551Q9HCM1 1747 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 ANKRD31Q8N7Z5 1873 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 BECN2A8MW95 431 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 GOLGA6L19H0YKK7 550 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 M0R2N6 131 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 NEMFO60524 1076 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 NMT2O60551 498 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TOP1P11387 765 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 CLK2P49760 499 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 EVX2Q03828 476 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 GABPAQ06546 454 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 NR5A1Q13285 461 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 IRF5Q13568 498 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 DHX8Q14562 1220 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 NCAPHQ15003 741 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TSR1Q2NL82 804 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 LONRF3Q496Y0 759 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 STYK1Q6J9G0 422 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 C11orf57Q6ZUT1 292 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 PODNQ7Z5L7 613 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 METTL3Q86U44 580 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 FOXP4Q8IVH2 680 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TEX11Q8IYF3 940 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TRIML1Q8N9V2 468 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 DAGLBQ8NCG7 672 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 PNMA1Q8ND90 353 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 SPATA20Q8TB22 786 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 KIAA1524Q8TCG1 905 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 DYNLL2Q96FJ2 89 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 CLIC6Q96NY7 704 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 GPR101Q96P66 508 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-213ENST00000569687 EYA3Q99504 573 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 EPAS1Q99814 870 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TMEM47Q9BQJ4 181 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 TRIM5Q9C035 493 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 VPS54Q9P1Q0 977 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 MAD2L2Q9UI95 211 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 JAG2Q9Y219 1238 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 PCDHB6Q9Y5E3 794 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 CNTNAP5Q8WYK1 1306 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms