RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 ARHGEF10LQ9HCE6 1279 aa15.15■□□□□ 0.02
CNEP1R1-211ENST00000569647 TMX2Q9Y320 296 aa15.15■□□□□ 0.02
CNEP1R1-211ENST00000569647 TTLL1O95922 423 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 FLT3LGP49771 235 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 HERVK_113P62684 666 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 MKL1Q969V6 931 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 C12orf42Q96LP6 360 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 FEZ1Q99689 392 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 SYNPO2Q9UMS6 1093 aa15.14■□□□□ 0.01
CNEP1R1-211ENST00000569647 RLFQ13129 1914 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 PARP14Q460N5 1801 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP14P54578 494 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 ANAPC15P60006 121 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 MTFR1Q15390 333 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 SEC23AQ15436 765 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 ENAHQ8N8S7 591 aaPredicted RBP15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 SLAIN1Q8ND83 568 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 NEK1Q96PY6 1258 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 TNKSO95271 1327 aa15.13■□□□□ 0.01
CNEP1R1-211ENST00000569647 PRC1O43663 620 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 ADCY3O60266 1144 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 PEX10O60683 326 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 MCM5P33992 734 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 ATP2B2Q01814 1243 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 CCDC178Q5BJE1 867 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 KIAA1755Q5JYT7 1200 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 COA7Q96BR5 231 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 TTC14Q96N46 770 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 MTA3Q9BTC8 594 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 VCPKMTQ9H867 229 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 TXNRD2Q9NNW7 524 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 STX8Q9UNK0 236 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 WDR19Q8NEZ3 1342 aa15.12■□□□□ 0.01
CNEP1R1-211ENST00000569647 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 VCAM1P19320 739 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 EXOSC10Q01780 885 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 IRF5Q13568 498 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 CHST3Q7LGC8 479 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 LRRC47Q8N1G4 583 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 GMCL1P1Q8NEA9 526 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 IGDCC4Q8TDY8 1250 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 UBAC1Q9BSL1 405 aa15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 BIN2Q9UBW5 565 aaPredicted RBP15.11■□□□□ 0.01
CNEP1R1-211ENST00000569647 COL11A1P12107 1806 aaPredicted RBP15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L15C9J2P7 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L13C9JLJ4 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L11C9JVI0 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L18D6R9N7 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L22D6RA61 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L17D6RBQ6 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L19D6RCP7 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L20D6RJB6 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 TOP1P11387 765 aaKnown RBP15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 ELNP15502 786 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 CASTP20810 708 aaKnown RBP15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 PSMA5P28066 241 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 ERVK-9P63128 1117 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 ERVK-24P63145 666 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 USP17L24Q0WX57 530 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 BLOC1S2Q6QNY1 142 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 PXYLP1Q8TE99 480 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 TMEM87BQ96K49 555 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 C22orf23Q9BZE7 217 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 RBPJLQ9UBG7 517 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 CEP290O15078 2479 aa15.1■□□□□ 0.01
CNEP1R1-211ENST00000569647 RANBP2P49792 3224 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 A0A0G2JMZ2 1700 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 F5H6K3 240 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 SH2B2O14492 632 aaPredicted RBP15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 IFIT3O14879 490 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 NDUFB10O96000 172 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 CCL5P13501 91 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 CPA1P15085 419 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 RPS6KB1P23443 525 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 UBXN2AP68543 259 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 KLRC3Q07444 240 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 SART3Q15020 963 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 CATSPERGQ6ZRH7 1159 aa15.09■□□□□ 0.01
CNEP1R1-211ENST00000569647 LPAR1Q92633 364 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms