RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	PRDM14	Q9GZV8	571 aa		5.25	□□□□□ -1.57
BBS4-215	ENST00000569001	MKRN2	Q9H000	416 aa	Known RBP	5.25	□□□□□ -1.57
BBS4-215	ENST00000569001	BCL11A	Q9H165	835 aa		5.25	□□□□□ -1.57
BBS4-215	ENST00000569001	UNCX	A6NJT0	531 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001		C9IYK1	514 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	RAC2	P15153	192 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	RNF4	P78317	190 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	ZYX	Q15942	572 aa	Known RBP	5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	SIRT2	Q8IXJ6	389 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	TCTN2	Q96GX1	697 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	G6PC3	Q9BUM1	346 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	GFOD1	Q9NXC2	390 aa		5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	DDX41	Q9UJV9	622 aa	Known RBP	5.24	□□□□□ -1.57
BBS4-215	ENST00000569001	MEIS3P2	A8K0S8	358 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	USP2	O75604	605 aa	Predicted RBP	5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	SYP	P08247	313 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	WAPL	Q7Z5K2	1190 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	METTL16	Q86W50	562 aa	Known RBP	5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	MRRF	Q96E11	262 aa	Known RBP	5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	CCDC120	Q96HB5	630 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	FERD3L	Q96RJ6	166 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	ZNRF3	Q9ULT6	936 aa		5.23	□□□□□ -1.57
BBS4-215	ENST00000569001	TMEM82	A0PJX8	343 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	NOTO	A8MTQ0	251 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	TNFRSF10C	O14798	259 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	PSPN	O60542	156 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	SDHB	P21912	280 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	HDLBP	Q00341	1268 aa	Known RBP	5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	PAK2	Q13177	524 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	FZD5	Q13467	585 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	KIR3DS1	Q14943	382 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	BBS9	Q3SYG4	887 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	PPFIBP1	Q86W92	1011 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	PDZD8	Q8NEN9	1154 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	FAM84A	Q96KN4	292 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	SLC38A3	Q99624	504 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	METTL5	Q9NRN9	209 aa	Known RBP	5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	GINM1	Q9NU53	330 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	GPR160	Q9UJ42	338 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	ZMYM5	Q9UJ78	669 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	FBXL21	Q9UKT6	434 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	TCFL5	Q9UL49	500 aa		5.22	□□□□□ -1.57
BBS4-215	ENST00000569001	SCAMP3	O14828	347 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	SIGLEC6	O43699	453 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	KRT1	P04264	644 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	TP53	P04637	393 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	C1QTNF9	P0C862	333 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	CTSK	P43235	329 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	PKN1	Q16512	942 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	DCAF15	Q66K64	600 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	CRTC3	Q6UUV7	619 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	EPB41L4B	Q9H329	900 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	CHST7	Q9NS84	486 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	FAM53C	Q9NYF3	392 aa		5.21	□□□□□ -1.58
BBS4-215	ENST00000569001	SSU72P8	A0A1W2PR75	194 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	SHOX	O15266	292 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	PCBP3	P57721	371 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	AUH	Q13825	339 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	ZNF605	Q86T29	641 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	LSR	Q86X29	649 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	NT5DC4	Q86YG4	428 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	DAGLB	Q8NCG7	672 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	LINC01599	Q8WXQ3	324 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	SHISA4	Q96DD7	197 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	HHIPL1	Q96JK4	782 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	SUCO	Q9UBS9	1254 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	EFR3B	Q9Y2G0	817 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	ZNF281	Q9Y2X9	895 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	PCDHB12	Q9Y5F1	795 aa		5.2	□□□□□ -1.58
BBS4-215	ENST00000569001	FITM1	A5D6W6	292 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	BTBD11	A6QL63	1104 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	UNC5A	Q6ZN44	842 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	RNF111	Q6ZNA4	994 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	CEP128	Q6ZU80	1094 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	CCDC144CP	Q8IYA2	1237 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	OXR1	Q8N573	874 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	ZNF655	Q8N720	491 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	ENOX1	Q8TC92	643 aa	Known RBP	5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	DHX38	Q92620	1227 aa	Known RBP	5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	BRF1	Q92994	677 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	SYTL4	Q96C24	671 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	MAP6	Q96JE9	813 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	PLCD4	Q9BRC7	762 aa		5.19	□□□□□ -1.58
BBS4-215	ENST00000569001	DBX1	A6NMT0	343 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	PDE6B	P35913	854 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	CCNF	P41002	786 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	RAP1GAP	P47736	663 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	RAD51AP2	Q09MP3	1159 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	DUSP4	Q13115	394 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	CILP2	Q8IUL8	1156 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	ZNF654	Q8IZM8	581 aa		5.18	□□□□□ -1.58
BBS4-215	ENST00000569001	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.18	□□□□□ -1.58

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