RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 A0A1B0GUL6 1792 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 DUOX1Q9NRD9 1551 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 SNED1Q8TER0 1413 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 IRS2Q9Y4H2 1338 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 NFKBIEO00221 500 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 EML1O00423 815 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 PPIP5K2O43314 1243 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 FAM157BP0CG42 384 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 MX1P20591 662 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 ADH6P28332 368 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 HIBADHP31937 336 aaKnown RBP9.43□□□□□ -0.9
SMG1-214ENST00000568038 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 CCDC158Q5M9N0 1113 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 TTC39AQ5SRH9 613 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
SMG1-214ENST00000568038 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 KLF15Q9UIH9 416 aa9.43□□□□□ -0.9
SMG1-214ENST00000568038 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 MED23Q9ULK4 1368 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 PPP1R12BO60237 982 aaPredicted RBP9.42□□□□□ -0.9
SMG1-214ENST00000568038 FRAT2O75474 233 aaPredicted RBP9.42□□□□□ -0.9
SMG1-214ENST00000568038 IARSP41252 1262 aaKnown RBP9.42□□□□□ -0.9
SMG1-214ENST00000568038 PDE1AP54750 535 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 PSMA6P60900 246 aaKnown RBP9.42□□□□□ -0.9
SMG1-214ENST00000568038 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 ZNF804AQ7Z570 1209 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 BOLA2Q9H3K6 86 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 DBNDD1Q9H9R9 158 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
SMG1-214ENST00000568038 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
SMG1-214ENST00000568038 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 LGR5O75473 907 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 IGHA1P01876 353 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 GRIN2CQ14957 1233 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
SMG1-214ENST00000568038 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 SIX5Q8N196 739 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 COA1Q9GZY4 146 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 CD209Q9NNX6 404 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
SMG1-214ENST00000568038 STAP2Q9UGK3 403 aa9.41□□□□□ -0.9
SMG1-214ENST00000568038 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 LTBP3Q9NS15 1303 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 ERC2O15083 957 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 ECE2O60344 883 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 GLRX3O76003 335 aaKnown RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 MAP4K4O95819 1239 aaPredicted RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 ATP5JP18859 108 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 MCAMP43121 646 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 PRELPP51888 382 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 SFSWAPQ12872 951 aaKnown RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 PI16Q6UXB8 463 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 TDRD7Q8NHU6 1098 aaKnown RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.9
SMG1-214ENST00000568038 VPS33BQ9H267 617 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 SUV39H2Q9H5I1 410 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 JAG2Q9Y219 1238 aa9.4□□□□□ -0.9
SMG1-214ENST00000568038 ARAP2Q8WZ64 1704 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 M0R2N6 131 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 EFSO43281 561 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 ZAP70P43403 619 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 RASGRF1Q13972 1273 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 SCG3Q8WXD2 468 aaKnown RBP9.39□□□□□ -0.91
SMG1-214ENST00000568038 JDP2Q8WYK2 163 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
SMG1-214ENST00000568038 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 KCNQ5Q9NR82 932 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 DENND2AQ9ULE3 1009 aa9.39□□□□□ -0.91
SMG1-214ENST00000568038 AOX1Q06278 1338 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 A6NJR5 290 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 YDJCA8MPS7 323 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 MSTNO14793 375 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 DKK1O94907 266 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 IL1R1P14778 569 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 HOXB4P17483 251 aaPredicted RBP9.38□□□□□ -0.91
SMG1-214ENST00000568038 LMNB1P20700 586 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 COL8A1P27658 744 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
SMG1-214ENST00000568038 SEC13P55735 322 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 ZNF468Q5VIY5 522 aaPredicted RBP9.38□□□□□ -0.91
SMG1-214ENST00000568038 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
SMG1-214ENST00000568038 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms