RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LMCD1Q9NZU5 365 aa6.79□□□□□ -1.32
PALB2-203ENST00000565038 DUSP13Q9UII6 198 aa6.79□□□□□ -1.32
PALB2-203ENST00000565038 ZNF214Q9UL59 606 aaPredicted RBP6.79□□□□□ -1.32
PALB2-203ENST00000565038 MEIS1O00470 390 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
PALB2-203ENST00000565038 ETFBP38117 255 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 GNPTABQ3T906 1256 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 SLC23A3Q6PIS1 610 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 TMPRSS7Q7RTY8 843 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
PALB2-203ENST00000565038 SLC43A3Q8NBI5 491 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 GFOD1Q9NXC2 390 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 PCDHB12Q9Y5F1 795 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 PCDHA11Q9Y5I1 949 aa6.78□□□□□ -1.32
PALB2-203ENST00000565038 PRAMEF1O95521 474 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 LTKP29376 864 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 IRAK1P51617 712 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 CASP7P55210 303 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 EGR3Q06889 387 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 C7orf61Q8IZ16 206 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 ZNF408Q9H9D4 720 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 RC3H2Q9HBD1 1191 aaKnown RBP6.77□□□□□ -1.33
PALB2-203ENST00000565038 SLAMF8Q9P0V8 285 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 SLC12A7Q9Y666 1083 aa6.77□□□□□ -1.33
PALB2-203ENST00000565038 SHOXO15266 292 aa6.76□□□□□ -1.33
PALB2-203ENST00000565038 CBLL1Q75N03 491 aa6.76□□□□□ -1.33
PALB2-203ENST00000565038 SYTL5Q8TDW5 730 aaPredicted RBP6.76□□□□□ -1.33
PALB2-203ENST00000565038 TCTN2Q96GX1 697 aa6.76□□□□□ -1.33
PALB2-203ENST00000565038 GMLQ99445 158 aa6.76□□□□□ -1.33
PALB2-203ENST00000565038 PHAXQ9H814 394 aaKnown RBP6.76□□□□□ -1.33
PALB2-203ENST00000565038 CHST7Q9NS84 486 aa6.76□□□□□ -1.33
PALB2-203ENST00000565038 DNAJC25-GNG10A0A024R161 153 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 SIGLEC6O43699 453 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 SLC7A5Q01650 507 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 BBS9Q3SYG4 887 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 USHBP1Q8N6Y0 703 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 DAGLBQ8NCG7 672 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
PALB2-203ENST00000565038 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
PALB2-203ENST00000565038 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
PALB2-203ENST00000565038 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 ZNF655Q8N720 491 aaPredicted RBP6.74□□□□□ -1.33
PALB2-203ENST00000565038 SMARCC1Q92922 1105 aaPredicted RBP6.74□□□□□ -1.33
PALB2-203ENST00000565038 BRF1Q92994 677 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 ALPK1Q96QP1 1244 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 DSCC1Q9BVC3 393 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 FOXP3Q9BZS1 431 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 ADAMTS10Q9H324 1103 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 GP6Q9HCN6 339 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 ACTR10Q9NZ32 417 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
PALB2-203ENST00000565038 SSU72P8A0A1W2PR75 194 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 FKTNO75072 461 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 SYPP08247 313 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 TAL1P17542 331 aaPredicted RBP6.73□□□□□ -1.33
PALB2-203ENST00000565038 CD247P20963 164 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 CTSKP43235 329 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 ZNF445P59923 1031 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 NOL9Q5SY16 702 aaKnown RBP6.73□□□□□ -1.33
PALB2-203ENST00000565038 HAUS7Q99871 368 aa6.73□□□□□ -1.33
PALB2-203ENST00000565038 EPHX1P07099 455 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 HK2P52789 917 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 PCBP3P57721 371 aaKnown RBP6.72□□□□□ -1.33
PALB2-203ENST00000565038 TEKQ02763 1124 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 TNNI3KQ59H18 835 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 HEATR6Q6AI08 1181 aaKnown RBP6.72□□□□□ -1.33
PALB2-203ENST00000565038 CRTC3Q6UUV7 619 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 ADCY4Q8NFM4 1077 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 FGD4Q96M96 766 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 C19orf73Q9NVV2 129 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 TCFL5Q9UL49 500 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 CTNND2Q9UQB3 1225 aa6.72□□□□□ -1.33
PALB2-203ENST00000565038 RPL10P27635 214 aaKnown RBP6.71□□□□□ -1.34
PALB2-203ENST00000565038 TCEAL1Q15170 157 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 C6orf15Q6UXA7 325 aaPredicted RBP6.71□□□□□ -1.34
PALB2-203ENST00000565038 ZPBP2Q6X784 338 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 RNF111Q6ZNA4 994 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 ADAT2Q7Z6V5 191 aaKnown RBP6.71□□□□□ -1.34
PALB2-203ENST00000565038 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
PALB2-203ENST00000565038 TANGO6Q9C0B7 1094 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 TMEM59LQ9UK28 342 aa6.71□□□□□ -1.34
PALB2-203ENST00000565038 B2RBV5 119 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 H0Y8X5 98 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 DDAH1O94760 285 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 ITGA4P13612 1032 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 GDNFP39905 211 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 ERVFC1P60507 584 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 MCTP1Q6DN14 999 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 ANKS3Q6ZW76 656 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 WAPLQ7Z5K2 1190 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms