RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
RNF40-204ENST00000563683 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 GYS2P54840 703 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 PAK1Q13153 545 aa11.73□□□□□ -0.53
RNF40-204ENST00000563683 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
RNF40-204ENST00000563683 CTAGE15A4D2H0 777 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 SCG2P13521 617 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 ARID5AQ03989 594 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 PDE4DQ08499 809 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 TBC1D8BQ0IIM8 1120 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 INF2Q27J81 1249 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
RNF40-204ENST00000563683 CTAGE6Q86UF2 777 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 CTAGE4Q8IX94 777 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 AGXT2Q9BYV1 514 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
RNF40-204ENST00000563683 PLEKHA8P1O95397 391 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
RNF40-204ENST00000563683 CSF1RP07333 972 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
RNF40-204ENST00000563683 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 H3BQF6 201 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 FOXN1O15353 648 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 KCNQ2O43526 872 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 FAM107BQ9H098 131 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 JRKLQ9Y4A0 524 aa11.72□□□□□ -0.53
RNF40-204ENST00000563683 UBN2Q6ZU65 1347 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CYLC1P35663 651 aaPredicted RBP11.71□□□□□ -0.53
RNF40-204ENST00000563683 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CSGALNACT2Q8N6G5 542 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 NELFBQ8WX92 580 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 MAN1B1Q9UKM7 699 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 PHACTR2O75167 634 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CASP7P55210 303 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CT47A1Q5JQC4 288 aaPredicted RBP11.71□□□□□ -0.53
RNF40-204ENST00000563683 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 DPF2Q92785 391 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 CCDC42Q96M95 316 aa11.71□□□□□ -0.53
RNF40-204ENST00000563683 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 ABCC6O95255 1503 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 FANCGO15287 622 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 USP17L8P0C7I0 530 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 SHC4Q6S5L8 630 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 DYMQ7RTS9 669 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 KIFC2Q96AC6 838 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 PRDX5P30044 214 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 TICAM2Q86XR7 235 aa11.71□□□□□ -0.54
RNF40-204ENST00000563683 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.54
RNF40-204ENST00000563683 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.54
RNF40-204ENST00000563683 MYH15Q9Y2K3 1946 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 NMT2O60551 498 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 PLCG2P16885 1265 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 PAFAH1B1P43034 410 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
RNF40-204ENST00000563683 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 DYNLL2Q96FJ2 89 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
RNF40-204ENST00000563683 PLCD1P51178 756 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
RNF40-204ENST00000563683 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 RAB21Q9UL25 225 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 TMEM232C9JQI7 657 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 CYP2D6P10635 497 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 MECOMQ03112 1051 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 MFSD14BQ5SR56 506 aa11.7□□□□□ -0.54
RNF40-204ENST00000563683 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
RNF40-204ENST00000563683 MACROD2A1Z1Q3 448 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 SF3B2Q13435 895 aaKnown RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 RGS22Q8NE09 1264 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 EYA3Q99504 573 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 NOC4LQ9BVI4 516 aaKnown RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 HSD3B7Q9H2F3 369 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 BIN2Q9UBW5 565 aaPredicted RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 KIF5AQ12840 1032 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms