RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 CCT2P78371 535 aaKnown RBP17.2■□□□□ 0.34
CDH11-207ENST00000563255 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
CDH11-207ENST00000563255 PRPF38BQ5VTL8 546 aaKnown RBP17.2■□□□□ 0.34
CDH11-207ENST00000563255 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 MYL10Q9BUA6 226 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 WDR18Q9BV38 432 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
CDH11-207ENST00000563255 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
CDH11-207ENST00000563255 CSADQ9Y600 493 aa17.2■□□□□ 0.34
CDH11-207ENST00000563255 A0A1W2PRG0 241 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 MANSC4A6NHS7 340 aaPredicted RBP17.19■□□□□ 0.34
CDH11-207ENST00000563255 ALDH1A1P00352 501 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 SNHG28P0DPA3 235 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 INHBEP58166 350 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 VGLL4Q14135 290 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 GRM4Q14833 912 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 RTN1Q16799 776 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 GMCL1P1Q8NEA9 526 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
CDH11-207ENST00000563255 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
CDH11-207ENST00000563255 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
CDH11-207ENST00000563255 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
CDH11-207ENST00000563255 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
CDH11-207ENST00000563255 LOC285556D6RIA3 1793 aa17.18■□□□□ 0.34
CDH11-207ENST00000563255 RXRAP19793 462 aa17.18■□□□□ 0.34
CDH11-207ENST00000563255 CDC27P30260 824 aa17.18■□□□□ 0.34
CDH11-207ENST00000563255 KIF5BP33176 963 aa17.18■□□□□ 0.34
CDH11-207ENST00000563255 FBXO46Q6PJ61 603 aaPredicted RBP17.18■□□□□ 0.34
CDH11-207ENST00000563255 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
CDH11-207ENST00000563255 CFHR5Q9BXR6 569 aa17.18■□□□□ 0.34
CDH11-207ENST00000563255 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.18■□□□□ 0.34
CDH11-207ENST00000563255 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
CDH11-207ENST00000563255 F5H6K3 240 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 PDHBP11177 359 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 ADD1P35611 737 aaKnown RBP17.17■□□□□ 0.34
CDH11-207ENST00000563255 GNAQP50148 359 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 KLRC3Q07444 240 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
CDH11-207ENST00000563255 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 IFNL1Q8IU54 200 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 ACER1Q8TDN7 264 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 VCPKMTQ9H867 229 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
CDH11-207ENST00000563255 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
CDH11-207ENST00000563255 C19orf81C9J6K1 198 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
CDH11-207ENST00000563255 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
CDH11-207ENST00000563255 ZBTB48P10074 688 aaPredicted RBP17.16■□□□□ 0.34
CDH11-207ENST00000563255 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 PPATQ06203 517 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 NTRK3Q16288 839 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 GMCL1Q96IK5 515 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
CDH11-207ENST00000563255 AFG3L2Q9Y4W6 797 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
CDH11-207ENST00000563255 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 CPLX1O14810 134 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 CDKL5O76039 1030 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 IFNAR1P17181 557 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 USP14P54578 494 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
CDH11-207ENST00000563255 CCDC84Q86UT8 332 aaPredicted RBP17.15■□□□□ 0.34
CDH11-207ENST00000563255 NSUN7Q8NE18 718 aaKnown RBP17.15■□□□□ 0.34
CDH11-207ENST00000563255 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
CDH11-207ENST00000563255 RLFQ13129 1914 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDH11-207ENST00000563255 NDUFB10O96000 172 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 SLC1A4P43007 532 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 BACE1P56817 501 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 ZNF543Q08ER8 600 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 SPP2Q13103 211 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 LPAR1Q92633 364 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 FEZ1Q99689 392 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 ELP3Q9H9T3 547 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
CDH11-207ENST00000563255 TRIM17Q9Y577 477 aa17.14■□□□□ 0.33
CDH11-207ENST00000563255 BMP3P12645 472 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms