RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 BAZ2AQ9UIF9 1905 aaKnown RBP14.79□□□□□ -0.04
USB1-207ENST00000563149 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 H7C1D1 291 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 WNT7AO00755 349 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 N4BP3O15049 544 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 MYL1P05976 194 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 TUBBP07437 444 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 GTF2E1P29083 439 aaPredicted RBP14.79□□□□□ -0.04
USB1-207ENST00000563149 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
USB1-207ENST00000563149 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 KRT31Q15323 416 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 DDB1Q16531 1140 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 CCDC178Q5BJE1 867 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 SLC10A5Q5PT55 438 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 CYP26C1Q6V0L0 522 aa14.79□□□□□ -0.04
USB1-207ENST00000563149 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 CYP2D7A0A087X1C5 515 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 hCG_1642624A0A1W2PR95 340 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 CTAGE9A4FU28 777 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 SEC31AO94979 1220 aaKnown RBP14.78□□□□□ -0.04
USB1-207ENST00000563149 CASP1P29466 404 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 TCP11X2Q5H9J9 407 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 ZNF384Q8TF68 577 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 CPLX3Q8WVH0 158 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 DCP1AQ9NPI6 582 aaPredicted RBP14.78□□□□□ -0.04
USB1-207ENST00000563149 LZTFL1Q9NQ48 299 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 ST7Q9NRC1 585 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 ABHD10Q9NUJ1 306 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 SMIM22K7EJ46 135 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 RPN1P04843 607 aaKnown RBP14.78□□□□□ -0.04
USB1-207ENST00000563149 GNAQP50148 359 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 FXR1P51114 621 aaKnown RBP eCLIP14.78□□□□□ -0.04
USB1-207ENST00000563149 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 ZNF569Q5MCW4 686 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 GALNT17Q6IS24 598 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
USB1-207ENST00000563149 BLIDQ8IZY5 108 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 CALCOCO1Q9P1Z2 691 aa14.78□□□□□ -0.04
USB1-207ENST00000563149 MYH14Q7Z406 1995 aaKnown RBP14.77□□□□□ -0.04
USB1-207ENST00000563149 COL4A1P02462 1669 aa14.77□□□□□ -0.04
USB1-207ENST00000563149 ADAMTS2O95450 1211 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 USP5P45974 858 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 MECOMQ03112 1051 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 KCNB1Q14721 858 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 WHAMMP3Q1A5X7 153 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 NOM1Q5C9Z4 860 aaKnown RBP14.77□□□□□ -0.05
USB1-207ENST00000563149 DGKHQ86XP1 1220 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 NELFBQ8WX92 580 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 FUT8Q9BYC5 575 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 ANKRD2Q9GZV1 360 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.77□□□□□ -0.05
USB1-207ENST00000563149 RAB21Q9UL25 225 aa14.77□□□□□ -0.05
USB1-207ENST00000563149 A0A1W2PQC6 194 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 KCNJ18B7U540 433 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 ERLIN1O75477 346 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 SASH3O75995 380 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 MCM7P33993 719 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 PIP4K2BP78356 416 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 KCNJ12Q14500 433 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 SMC1AQ14683 1233 aaKnown RBP14.76□□□□□ -0.05
USB1-207ENST00000563149 IL17AQ16552 155 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 KIF4BQ2VIQ3 1234 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 WWC2Q6AWC2 1192 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 MTRQ99707 1265 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 NAPGQ99747 312 aaPredicted RBP14.76□□□□□ -0.05
USB1-207ENST00000563149 BLZF1Q9H2G9 400 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 PCDHA4Q9UN74 947 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
USB1-207ENST00000563149 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 ROBO1Q9Y6N7 1651 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 SPATA31A1Q5TZJ5 1347 aa14.76□□□□□ -0.05
USB1-207ENST00000563149 TSPY2A6NKD2 308 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 LAD1O00515 517 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 MAP2K7O14733 419 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 HIBADHP31937 336 aaKnown RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 CCT6AP40227 531 aaKnown RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 LONRF2Q1L5Z9 754 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 DAGLBQ8NCG7 672 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 NOC3LQ8WTT2 800 aaKnown RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 IRX2Q9BZI1 471 aaPredicted RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 VPS16Q9H269 839 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 EPC1Q9H2F5 836 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 KAT14Q9H8E8 782 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 CASZ1Q86V15 1759 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 MYH13Q9UKX3 1938 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 EEF1GP26641 437 aaKnown RBP14.75□□□□□ -0.05
USB1-207ENST00000563149 STAT6P42226 847 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 ERVK-24P63145 666 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 GPS2Q13227 327 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 STIM1Q13586 685 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 ADSSL1Q8N142 457 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 SLC35F6Q8N357 371 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 STAMQ92783 540 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms