RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TRIM10Q9UDY6 481 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 EPN1Q9Y6I3 576 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 MYH8P13535 1937 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 ENAHQ8N8S7 591 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 IQSEC3Q9UPP2 1182 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 LRRIQ3A6PVS8 624 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 SMIM22K7EJ46 135 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 ENC1O14682 589 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 CADPS2Q86UW7 1296 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 GOLGA6L1Q8N7Z2 621 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 ABCF2Q9UG63 623 aa15.75■□□□□ 0.11
VPS9D1-202ENST00000561976 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 NDUFA10O95299 355 aa15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 MCM7P33993 719 aa15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 ATP2C1P98194 919 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 GTPBP6O43824 516 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 AMPD2Q01433 879 aa15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 ZBTB1Q9Y2K1 713 aa15.74■□□□□ 0.11
VPS9D1-202ENST00000561976 E2F4Q16254 413 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 ZNF658Q5TYW1 1059 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 PIK3AP1Q6ZUJ8 805 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 MED4Q9NPJ6 270 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 HDAC6Q9UBN7 1215 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 RSPH14Q9UHP6 348 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 MYH6P13533 1939 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 MAGEB6P1A0A0J9YX57 407 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 FUT2Q10981 343 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 WDR93Q6P2C0 686 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 IQCA1Q86XH1 822 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-202ENST00000561976 RPN1P04843 607 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 NLRP5P59047 1200 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 FOXR1Q6PIV2 292 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 PYM1Q9BRP8 204 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 LUC7L2Q9Y383 392 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 CYP2D7A0A087X1C5 515 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 TTC26A0AVF1 554 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 CCDC122Q5T0U0 273 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 CAPZA3Q96KX2 299 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 MTRQ99707 1265 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 HAUS4Q9H6D7 363 aa15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 REXO2Q9Y3B8 237 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-202ENST00000561976 MYH3P11055 1940 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 PARP1P09874 1014 aaKnown RBP15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 PRCPP42785 496 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 TFR2Q9UP52 801 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 SAR1BQ9Y6B6 198 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 COL5A2P05997 1499 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 SRGAP2O75044 1071 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 CYP19A1P11511 503 aaPredicted RBP15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 USP14P54578 494 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 MAP9Q49MG5 647 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 TRAPPC11Q7Z392 1133 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 KIAA1328Q86T90 577 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 RASSF8Q8NHQ8 419 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 TNFRSF25Q93038 417 aa15.71■□□□□ 0.11
VPS9D1-202ENST00000561976 TRIM49BA6NDI0 452 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 H7C1D1 291 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 RNF40O75150 1001 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 CALM1P0DP23 149 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 CALM2P0DP24 149 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 CALM3P0DP25 149 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 STAT6P42226 847 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 PSMD14O00487 310 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 MCM3P25205 808 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 IGHMBP2P38935 993 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 NPY5RQ15761 445 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 CTCFLQ8NI51 663 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 ANAPC4Q9UJX5 808 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 TROAPQ12815 778 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 IL17AQ16552 155 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 TMTC3Q6ZXV5 915 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 GDAP1L1Q96MZ0 367 aa15.7■□□□□ 0.1
VPS9D1-202ENST00000561976 RPS6KA5O75582 802 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 AFAP1L1Q8TED9 768 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 BCL9LQ86UU0 1499 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 ZMYND10O75800 440 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 KRT83P78385 493 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 LRRC31Q6UY01 552 aa15.69■□□□□ 0.1
VPS9D1-202ENST00000561976 SRBD1Q8N5C6 995 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms