RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 CCDC192P0DO97 292 aa11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 PFKFB1P16118 471 aa11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 GMLQ99445 158 aa11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 BAZ2BQ9UIF8 2168 aaKnown RBP11.73□□□□□ -0.53
TUBGCP4-202ENST00000561691 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 PTPREP23469 700 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 KIF5BP33176 963 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 RILPL1Q5EBL4 403 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 TTLL6Q8N841 843 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 PSMD1Q99460 953 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 EHD4Q9H223 541 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 ZNF287Q9HBT7 754 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 MTMR4Q9NYA4 1195 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CTAGE5O15320 804 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 TOP1P11387 765 aaKnown RBP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 KRT2P35908 639 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CACNB3P54284 484 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 METTL16Q86W50 562 aaKnown RBP11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
TUBGCP4-202ENST00000561691 A0A087WWV3 80 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 CUTAO60888 179 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 SYCP1Q15431 976 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 WWC2Q6AWC2 1192 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 ERCC4Q92889 916 aaPredicted RBP11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 TIGD1Q96MW7 591 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 SPZ1Q9BXG8 430 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 STX8Q9UNK0 236 aa11.71□□□□□ -0.53
TUBGCP4-202ENST00000561691 G3V3G9 751 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 STXBP3O00186 592 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 KINO60870 393 aaKnown RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 ZNF202O95125 648 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 GOLGA8HP0CJ92 632 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 GNAQP50148 359 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 IQCB1Q15051 598 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SHROOM1Q2M3G4 852 aaPredicted RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 C11orf57Q6ZUT1 292 aaPredicted RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SUPT20HQ8NEM7 779 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 USP25Q9UHP3 1055 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 USP17L5A8MUK1 530 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 PDHBP11177 359 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 CAPN2P17655 700 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 DNAJC25Q9H1X3 360 aa11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
TUBGCP4-202ENST00000561691 ATRNL1Q5VV63 1379 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 COL2A1P02458 1487 aaPredicted RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 XBP1P17861 261 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 MDM2Q00987 491 aaPredicted RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 RTKN2Q8IZC4 609 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 C17orf53Q8N3J3 647 aaPredicted RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 PRMT6Q96LA8 375 aaPredicted RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
TUBGCP4-202ENST00000561691 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 JAG1P78504 1218 aa11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 TERF2Q15554 542 aa11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 C4orf32Q8N8J7 132 aa11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-202ENST00000561691 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms