RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	RRP12	Q5JTH9	1297 aa	Known RBP	11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	DGKH	Q86XP1	1220 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	ZNF280C	Q8ND82	737 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	UBAC1	Q9BSL1	405 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	MTMR4	Q9NYA4	1195 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	PLA2G2E	Q9NZK7	142 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	ZSWIM5	Q9P217	1185 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	SNX14	Q9Y5W7	946 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	DOCK1	Q14185	1865 aa		11.65	□□□□□ -0.54
KNSTRN-215	ENST00000561367	SMIM22	K7EJ46	135 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GDF11	O95390	407 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SLC10A3	P09131	477 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PRKCSH	P14314	528 aa	Predicted RBP	11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GTF2A2	P52657	109 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	NOG	Q13253	232 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RRP1B	Q14684	758 aa	Known RBP	11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RAB3GAP1	Q15042	981 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	BLOC1S2	Q6QNY1	142 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MOB2	Q70IA6	237 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	DHX32	Q7L7V1	743 aa	Known RBP	11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	STK11IP	Q8N1F8	1099 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FBXL16	Q8N461	479 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ANKS1A	Q92625	1134 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MKL1	Q969V6	931 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	OPTN	Q96CV9	577 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	WNK4	Q96J92	1243 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	C22orf23	Q9BZE7	217 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	KIAA1683	Q9H0B3	1180 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ELP3	Q9H9T3	547 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	KCNH4	Q9UQ05	1017 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	AFG3L2	Q9Y4W6	797 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ZHX2	Q9Y6X8	837 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MYH8	P13535	1937 aa		11.64	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MANSC4	A6NHS7	340 aa	Predicted RBP	11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	USP17L10	C9JJH3	530 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GUCY1A2	P33402	732 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	LIFR	P42702	1097 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	BACE1	P56817	501 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SNAPC2	Q13487	334 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SEPT2	Q15019	361 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SH3D19	Q5HYK7	790 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FAM47A	Q5JRC9	791 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SPRYD7	Q5W111	196 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	STOX1	Q6ZVD7	989 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FASTKD5	Q7L8L6	764 aa	Known RBP	11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RASAL3	Q86YV0	1011 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	LPAR1	Q92633	364 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CEP95	Q96GE4	821 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CLMN	Q96JQ2	1002 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FZD1	Q9UP38	647 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TMX2	Q9Y320	296 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CYP46A1	Q9Y6A2	500 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	OTOF	Q9HC10	1997 aa		11.63	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GREB1L	Q9C091	1923 aa	Predicted RBP	11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SLURP2	P0DP57	97 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TOP1	P11387	765 aa	Known RBP	11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CETP	P11597	493 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	MAP2K2	P36507	400 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SREBF2	Q12772	1141 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RUFY3	Q7L099	469 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GMCL1P1	Q8NEA9	526 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	C12orf42	Q96LP6	360 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	JAKMIP1	Q96N16	626 aa	Known RBP	11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TBC1D32	Q96NH3	1257 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	GOPC	Q9HD26	462 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ZCCHC17	Q9NP64	241 aa	Known RBP	11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	INCENP	Q9NQS7	918 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	IL17RB	Q9NRM6	502 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	STX8	Q9UNK0	236 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TACC3	Q9Y6A5	838 aa		11.62	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TNKS	O95271	1327 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ATAD5	Q96QE3	1844 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367		A0A0G2JLL6	359 aa	Predicted RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	IFIT3	O14879	490 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	IRF6	O14896	467 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PRC1	O43663	620 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	EEF2	P13639	858 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	CAST	P20810	708 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RPS6KB1	P23443	525 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RCAN1	P53805	252 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	JAG1	P78504	1218 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	EXOSC10	Q01780	885 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	SPP2	Q13103	211 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	WTAP	Q15007	396 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ANKRD1	Q15327	319 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ADCK5	Q3MIX3	580 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	IFIT1B	Q5T764	474 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	RCSD1	Q6JBY9	416 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	USP17L2	Q6R6M4	530 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	LAPTM4B	Q86VI4	370 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ZFR	Q96KR1	1074 aa	Known RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	FEZ1	Q99689	392 aa		11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.61	□□□□□ -0.55
KNSTRN-215	ENST00000561367	TMOD4	Q9NZQ9	345 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms