RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 KCNK3O14649 394 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 H2AFZP0C0S5 128 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 MAN1A1P33908 653 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 PNOCQ13519 176 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 H2AFVQ71UI9 128 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 ZNF654Q8IZM8 581 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 RIOK1Q9BRS2 568 aaKnown RBP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 CARD10Q9BWT7 1032 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 CAPS2Q9BXY5 557 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 AATFQ9NY61 560 aaKnown RBP eCLIP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 H0YCG3 227 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 GNPATO15228 680 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 TNNI1P19237 187 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 IL13P35225 146 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 RAB20Q9NX57 234 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 VPS54Q9P1Q0 977 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 PNMA6EA0A0J9YXQ4 647 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 MORC3Q14149 939 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 HACE1Q8IYU2 909 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 KLHDC4Q8TBB5 520 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 BCAS4Q8TDM0 211 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 HVCN1Q96D96 273 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 A2MP01023 1474 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 PRPF6O94906 941 aaKnown RBP14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 IFNB1P01574 187 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 STMN1P16949 149 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 CUL4BQ13620 913 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 ZMYM3Q14202 1370 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 ME3Q16798 604 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 STAMQ92783 540 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 CACYBPQ9HB71 228 aaKnown RBP14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 SPATA1Q5VX52 437 aa14.52□□□□□ -0.08
CSPG4P11-201ENST00000560634 GTPBP6O43824 516 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZAP70P43403 619 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 GUCY2FP51841 1108 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 MAEAQ7L5Y9 396 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 CHURC1Q8WUH1 139 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 RUNDC3BQ96NL0 473 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZNF215Q9UL58 517 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 PDE6BP35913 854 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 ADCY8P40145 1251 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 KIF11P52732 1056 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 GABPAQ06546 454 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 RABGGTAQ92696 567 aa14.52□□□□□ -0.09
CSPG4P11-201ENST00000560634 PFKFB2O60825 505 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 CFBP00751 764 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 KRT19P08727 400 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 NSMFQ6X4W1 530 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 HAUS8Q9BT25 410 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 BLIDQ8IZY5 108 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 MGARPQ8TDB4 240 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 ZNF594Q96JF6 807 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 STK38LQ9Y2H1 464 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 USP19O94966 1318 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 ARHGAP42A6NI28 874 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 GAS7O60861 476 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 DBN1Q16643 649 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 CCDC13Q8IYE1 715 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 KIAA0232Q92628 1395 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 EVI5O60447 810 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 AOC3Q16853 763 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 NACA2Q9H009 215 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 GINS2Q9Y248 185 aa14.51□□□□□ -0.09
CSPG4P11-201ENST00000560634 WDR46O15213 610 aaKnown RBP14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 ERCC3P19447 782 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 POLR2BP30876 1174 aaKnown RBP14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 LRRC8AQ8IWT6 810 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 GDAP1L1Q96MZ0 367 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 EPN1Q9Y6I3 576 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 PPARAQ07869 468 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 RAD51AP2Q09MP3 1159 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 MUM1L1Q5H9M0 696 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 GPBP1Q86WP2 473 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 NCAPGQ9BPX3 1015 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 LUC7L3O95232 432 aaKnown RBP14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 DEPTORQ8TB45 409 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 MTMR6Q9Y217 621 aa14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 BZW2Q9Y6E2 419 aaKnown RBP14.5□□□□□ -0.09
CSPG4P11-201ENST00000560634 DDX39AO00148 427 aaKnown RBP14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 RBBP5Q15291 538 aaKnown RBP14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 CCDC93Q567U6 631 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 TPH2Q8IWU9 490 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 SUPT20HQ8NEM7 779 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 SLC52A2Q9HAB3 445 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 A0A1W2PQ27 194 aa14.49□□□□□ -0.09
CSPG4P11-201ENST00000560634 A0A1W2PQ64 194 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms