RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 GPR25O00155 361 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 FKTNO75072 461 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 SDSP20132 328 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 IRX3P78415 501 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 MAP3K10Q02779 954 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 PDE4BQ07343 736 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 PABPC4Q13310 644 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 DGKZQ13574 1117 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 RRP1BQ14684 758 aaKnown RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 SHROOM1Q2M3G4 852 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 PKDCCQ504Y2 493 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 TTC22Q5TAA0 569 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 IFNL3Q8IZI9 196 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF296Q8WUU4 475 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-219ENST00000560483 PTPN18Q99952 460 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 TBC1D2Q9BYX2 928 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 AFG3L2Q9Y4W6 797 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 A0A0G2JLL6 359 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-219ENST00000560483 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 GSG1L2A8MUP6 293 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 GDF9O60383 454 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 PRDM1O75626 825 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 SHMT1P34896 483 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 CDK8P49336 464 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 SEPT2Q15019 361 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 ARHGEF6Q15052 776 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 GIMAP6Q6P9H5 292 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 PRRT2Q7Z6L0 340 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-219ENST00000560483 ANKRD23Q86SG2 305 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
LRRC28-219ENST00000560483 OSBPL3Q9H4L5 887 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 ARHGEF10LQ9HCE6 1279 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 CWC22Q9HCG8 908 aaKnown RBP9.51□□□□□ -0.89
LRRC28-219ENST00000560483 GINM1Q9NU53 330 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 CPA4Q9UI42 421 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 KCNH4Q9UQ05 1017 aa9.51□□□□□ -0.89
LRRC28-219ENST00000560483 LAMB1P07942 1786 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TSPY3P0CV98 308 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TSPY8P0CW00 308 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 CYP2C8P10632 490 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 AKR1B1P15121 316 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 USP14P54578 494 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 BACE1P56817 501 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 SP3Q02447 781 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 ICA1Q05084 483 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 PPARAQ07869 468 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TMEM179Q6ZVK1 233 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 C16orf86Q6ZW13 317 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF598Q86UK7 904 aaKnown RBP9.5□□□□□ -0.89
LRRC28-219ENST00000560483 CD99L2Q8TCZ2 262 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 RUFY2Q8WXA3 655 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 R3HDMLQ9H3Y0 253 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 SH2D4AQ9H788 454 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 CCDC171Q6TFL3 1326 aa9.5□□□□□ -0.89
LRRC28-219ENST00000560483 DDX60LQ5H9U9 1706 aaKnown RBP9.49□□□□□ -0.89
LRRC28-219ENST00000560483 C19orf81C9J6K1 198 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 SMIM22K7EJ46 135 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 RANBP6O60518 1105 aaKnown RBP9.49□□□□□ -0.89
LRRC28-219ENST00000560483 HAND2P61296 217 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 JAG1P78504 1218 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PRR20EP86478 221 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PRR20CP86479 221 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PRR20DP86480 221 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PRR20BP86481 221 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PRR20AP86496 221 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 VPS53Q5VIR6 699 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 ZNF589Q86UQ0 364 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-219ENST00000560483 METTL16Q86W50 562 aaKnown RBP9.49□□□□□ -0.89
LRRC28-219ENST00000560483 CLEC10AQ8IUN9 316 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 CCDC17Q96LX7 622 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 TANGO6Q9C0B7 1094 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-219ENST00000560483 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 AGTPBP1Q9UPW5 1226 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
LRRC28-219ENST00000560483 PTPRFP10586 1907 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 TSPY2A6NKD2 308 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 TLR2O60603 784 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 FMNL1O95466 1100 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 CFHP08603 1231 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 HSPD1P10809 573 aaKnown RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
LRRC28-219ENST00000560483 GABPAQ06546 454 aa9.48□□□□□ -0.89
LRRC28-219ENST00000560483 SBK1Q52WX2 424 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms