RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 F5H6K3 240 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 PDHBP11177 359 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 RCAN1P53805 252 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
HERC1-206ENST00000559996 PPATQ06203 517 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 KLRC3Q07444 240 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 FSTL1Q12841 308 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SPP2Q13103 211 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 STK3Q13188 491 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 GRM4Q14833 912 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 C2orf69Q8N8R5 385 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 FANCBQ8NB91 859 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 ZNF280CQ8ND82 737 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 GMCL1P1Q8NEA9 526 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 GTF3C6Q969F1 213 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 KIAA1683Q9H0B3 1180 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 VCPKMTQ9H867 229 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 KAT14Q9H8E8 782 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
HERC1-206ENST00000559996 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
HERC1-206ENST00000559996 KCNH4Q9UQ05 1017 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
HERC1-206ENST00000559996 USP17L10C9JJH3 530 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 IRF6O14896 467 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 ZBTB43O43298 467 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 CYTH3O43739 400 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 DDAH1O94760 285 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 NDUFB10O96000 172 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 BACE1P56817 501 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 MKRN3Q13064 507 aaKnown RBP10.96□□□□□ -0.65
HERC1-206ENST00000559996 TTLL12Q14166 644 aaPredicted RBP10.96□□□□□ -0.65
HERC1-206ENST00000559996 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
HERC1-206ENST00000559996 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 C12orf42Q96LP6 360 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 SH2B1Q9NRF2 756 aaPredicted RBP10.96□□□□□ -0.65
HERC1-206ENST00000559996 TLL2Q9Y6L7 1015 aa10.96□□□□□ -0.65
HERC1-206ENST00000559996 PLEKHA8P1O95397 391 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 GOLGA8HP0CJ92 632 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
HERC1-206ENST00000559996 PSEN1P49768 467 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 FGD1P98174 961 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 ZNF543Q08ER8 600 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 SLFN13Q68D06 897 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 POTEEQ6S8J3 1075 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CATIPQ7Z7H3 387 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 MICU3Q86XE3 530 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CCDC83Q8IWF9 413 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CCDC144CPQ8IYA2 1237 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CMTR1Q8N1G2 835 aaKnown RBP10.95□□□□□ -0.66
HERC1-206ENST00000559996 NSUN7Q8NE18 718 aaKnown RBP10.95□□□□□ -0.66
HERC1-206ENST00000559996 SMARCC2Q8TAQ2 1214 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 NUP133Q8WUM0 1156 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
HERC1-206ENST00000559996 SLKQ9H2G2 1235 aaPredicted RBP10.95□□□□□ -0.66
HERC1-206ENST00000559996 CPVLQ9H3G5 476 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 ARHGEF10LQ9HCE6 1279 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 CSADQ9Y600 493 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 PTPRFP10586 1907 aa10.95□□□□□ -0.66
HERC1-206ENST00000559996 A0A0G2JLL6 359 aaPredicted RBP10.94□□□□□ -0.66
HERC1-206ENST00000559996 TRIM75PA6NK02 468 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 FAM155AB1AL88 458 aaPredicted RBP10.94□□□□□ -0.66
HERC1-206ENST00000559996 C19orf81C9J6K1 198 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CXCL11O14625 94 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CALM1P0DP23 149 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CALM2P0DP24 149 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CALM3P0DP25 149 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
HERC1-206ENST00000559996 METAP2P50579 478 aaKnown RBP eCLIP10.94□□□□□ -0.66
HERC1-206ENST00000559996 HUNKP57058 714 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 PPIL2Q13356 520 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 MTMR2Q13614 643 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 BTNL9Q6UXG8 535 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 TMTC3Q6ZXV5 915 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 KCTD1Q719H9 257 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 PRRT2Q7Z6L0 340 aaPredicted RBP10.94□□□□□ -0.66
HERC1-206ENST00000559996 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
HERC1-206ENST00000559996 SHISA4Q96DD7 197 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 MTMR8Q96EF0 704 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 RIOX1Q9H6W3 641 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 AS3MTQ9HBK9 375 aa10.94□□□□□ -0.66
HERC1-206ENST00000559996 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms