RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 SHISA4Q96DD7 197 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 EPSTI1Q96J88 318 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 SPZ1Q9BXG8 430 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 GGA1Q9UJY5 639 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 LY75O60449 1722 aa18.46■□□□□ 0.55
APH1B-207ENST00000559971 GPR75-ASB3A0A0A6YYF3 556 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 USP17L8P0C7I0 530 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 CYP2D6P10635 497 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 FMR1Q06787 632 aaKnown RBP eCLIP18.46■□□□□ 0.54
APH1B-207ENST00000559971 E2F4Q16254 413 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 CCDC47Q96A33 483 aaKnown RBP18.46■□□□□ 0.54
APH1B-207ENST00000559971 AK8Q96MA6 479 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 RWDD2AQ9UIY3 292 aa18.46■□□□□ 0.54
APH1B-207ENST00000559971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.46■□□□□ 0.54
APH1B-207ENST00000559971 ITIH6Q6UXX5 1313 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 AKR1B15C9JRZ8 316 aaPredicted RBP18.45■□□□□ 0.54
APH1B-207ENST00000559971 GNA11P29992 359 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 EARS2Q5JPH6 523 aaKnown RBP18.45■□□□□ 0.54
APH1B-207ENST00000559971 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 PPP4R3BQ5MIZ7 849 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 CDKAL1Q5VV42 579 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 DTHD1Q6ZMT9 781 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 KRT25Q7Z3Z0 450 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
APH1B-207ENST00000559971 BARHL2Q9NY43 387 aa18.45■□□□□ 0.54
APH1B-207ENST00000559971 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
APH1B-207ENST00000559971 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
APH1B-207ENST00000559971 AFMP43652 599 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 STIM1Q13586 685 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 USP49Q70CQ1 688 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 TXNRD3Q86VQ6 643 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 ZNF397Q8NF99 534 aaPredicted RBP18.44■□□□□ 0.54
APH1B-207ENST00000559971 NEDD1Q8NHV4 660 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 CCSER1Q9C0I3 900 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 IL17RBQ9NRM6 502 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
APH1B-207ENST00000559971 FAM205CA6NFA0 338 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 LRRC10BA6NIK2 292 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 NMT2O60551 498 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 HOXA10P31260 410 aaPredicted RBP18.43■□□□□ 0.54
APH1B-207ENST00000559971 KCNQ4P56696 695 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 TUBB2AQ13885 445 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 KCNB1Q14721 858 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 ZNF658Q5TYW1 1059 aaPredicted RBP18.43■□□□□ 0.54
APH1B-207ENST00000559971 PDXDC2PQ6P474 469 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 CNGA4Q8IV77 575 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 SMAP1Q8IYB5 467 aaPredicted RBP18.43■□□□□ 0.54
APH1B-207ENST00000559971 NOC3LQ8WTT2 800 aaKnown RBP18.43■□□□□ 0.54
APH1B-207ENST00000559971 TUBB2BQ9BVA1 445 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 RTFDC1Q9BY42 306 aaPredicted RBP18.43■□□□□ 0.54
APH1B-207ENST00000559971 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 CD209Q9NNX6 404 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 INTS13Q9NVM9 706 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 TAF1P21675 1872 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
APH1B-207ENST00000559971 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 PPP1R3GB7ZBB8 358 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 H7C1D1 291 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 M0R2N6 131 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 MCM7P33993 719 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 TUBB4BP68371 445 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
APH1B-207ENST00000559971 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 GRAMD1CQ8IYS0 662 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 C4orf32Q8N8J7 132 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
APH1B-207ENST00000559971 LIMA1Q9UHB6 759 aaKnown RBP18.42■□□□□ 0.54
APH1B-207ENST00000559971 FAM205AQ6ZU69 1335 aa18.42■□□□□ 0.54
APH1B-207ENST00000559971 A0A087X0B3 334 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 ESYT2A0FGR8 921 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 UFL1O94874 794 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 RASA1P20936 1047 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 STAT6P42226 847 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 PAK1Q13153 545 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 SYT10Q6XYQ8 523 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 TMEM139Q8IV31 216 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 TC2NQ8N9U0 490 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 RRP36Q96EU6 259 aaKnown RBP18.41■□□□□ 0.54
APH1B-207ENST00000559971 OGFRQ9NZT2 677 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
APH1B-207ENST00000559971 PPP2R2CQ9Y2T4 447 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 GAKO14976 1311 aa18.41■□□□□ 0.54
APH1B-207ENST00000559971 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
APH1B-207ENST00000559971 UBA7P41226 1012 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 BTDP43251 543 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 NOVP48745 357 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 REXO1L1PQ8IX06 675 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 TSC1Q92574 1164 aa18.4■□□□□ 0.54
APH1B-207ENST00000559971 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms