RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
HMG20A-209ENST00000559728 PDHXO00330 501 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 RBM25P49756 843 aaKnown RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 ATP2B2Q01814 1243 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 TRDNQ13061 729 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 KRT32Q14532 448 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 DHX32Q7L7V1 743 aaKnown RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 FASTKD5Q7L8L6 764 aaKnown RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 RALYLQ86SE5 291 aaKnown RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
HMG20A-209ENST00000559728 MTA3Q9BTC8 594 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 SLC45A1Q9Y2W3 748 aa10.64□□□□□ -0.71
HMG20A-209ENST00000559728 ATAD5Q96QE3 1844 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
HMG20A-209ENST00000559728 CYP2C8P10632 490 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 C7P10643 843 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
HMG20A-209ENST00000559728 RPS6KB1P23443 525 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 MCM5P33992 734 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 USP14P54578 494 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 ANAPC15P60006 121 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 IER5LQ5T953 404 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 CATSPERGQ6ZRH7 1159 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 IQCA1Q86XH1 822 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 FBXL16Q8N461 479 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 LPAR1Q92633 364 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 GMCL1Q96IK5 515 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 FEZ1Q99689 392 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
HMG20A-209ENST00000559728 RPAP3Q9H6T3 665 aaPredicted RBP10.63□□□□□ -0.71
HMG20A-209ENST00000559728 ZCCHC17Q9NP64 241 aaKnown RBP10.63□□□□□ -0.71
HMG20A-209ENST00000559728 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 CA12O43570 354 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 PEX10O60683 326 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 CNMDO75829 334 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 PDHBP11177 359 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 MCCP23508 829 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 LIFRP42702 1097 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 CAP1Q01518 475 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
HMG20A-209ENST00000559728 TROAPQ12815 778 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 CRHR2Q13324 411 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 TOB2Q14106 344 aaPredicted RBP10.62□□□□□ -0.71
HMG20A-209ENST00000559728 CCDC178Q5BJE1 867 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 TMEM67Q5HYA8 995 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 FAM83BQ5T0W9 1011 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 SLFN13Q68D06 897 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 SGMS1Q86VZ5 419 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 TBC1D32Q96NH3 1257 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 P2RX7Q99572 595 aaKnown RBP10.62□□□□□ -0.71
HMG20A-209ENST00000559728 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
HMG20A-209ENST00000559728 ASCC2Q9H1I8 757 aaPredicted RBP10.62□□□□□ -0.71
HMG20A-209ENST00000559728 FBXO28Q9NVF7 368 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 TMOD4Q9NZQ9 345 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
HMG20A-209ENST00000559728 SPDYE16A6NNV3 312 aaPredicted RBP10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 WDR46O15213 610 aaKnown RBP10.61□□□□□ -0.71
HMG20A-209ENST00000559728 TRPA1O75762 1119 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 TBC1D8O95759 1140 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 HMGB1P09429 215 aaKnown RBP10.61□□□□□ -0.71
HMG20A-209ENST00000559728 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
HMG20A-209ENST00000559728 EVCP57679 992 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 WTAPQ15007 396 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 PPP4R3BQ5MIZ7 849 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 IFIT1BQ5T764 474 aaKnown RBP10.61□□□□□ -0.71
HMG20A-209ENST00000559728 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 BLOC1S2Q6QNY1 142 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 RUFY3Q7L099 469 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 REPS2Q8NFH8 660 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 CHMP4CQ96CF2 233 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 TMEM87BQ96K49 555 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 GOPCQ9HD26 462 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
HMG20A-209ENST00000559728 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms