RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 BLIDQ8IZY5 108 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 SEPT11Q9NVA2 429 aaKnown RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 RPAP1Q9BWH6 1393 aaPredicted RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 CCT6AP40227 531 aaKnown RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 MTIF2P46199 727 aaKnown RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 CASP7P55210 303 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 TYRO3Q06418 890 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 DNAJC25Q9H1X3 360 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 BRDTQ58F21 947 aaPredicted RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 TMC6Q7Z403 805 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 CHAMP1Q96JM3 812 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 CHD2O14647 1828 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 GCOM1H8Y6P7 765 aaPredicted RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 ZSCAN12O43309 604 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 CAVIN2O95810 425 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 POLR2MP0CAP2 368 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 RDXP35241 583 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 LUZP1Q86V48 1076 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 ZNF397Q8NF99 534 aaPredicted RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 INF2Q27J81 1249 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 DGKHQ86XP1 1220 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 SH2B2O14492 632 aaPredicted RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 STX1AQ16623 288 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 C9orf131Q5VYM1 1079 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 NCAPH2Q6IBW4 605 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 LRWD1Q9UFC0 647 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
CARMIL3-202ENST00000559694 NMT2O60551 498 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 LMAN1P49257 510 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 ANGEL2Q5VTE6 544 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 ARHGEF16Q5VV41 709 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 GINS2Q9Y248 185 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 NFAT5O94916 1531 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 PIK3C2AO00443 1686 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 LIFRP42702 1097 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 STAT2P52630 851 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 TTC14Q96N46 770 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 PIGSQ96S52 555 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 RMND1Q9NWS8 449 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 FAM13AO94988 1023 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 CDC42EP5Q6NZY7 148 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
CARMIL3-202ENST00000559694 KCTD2Q14681 263 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CALCRLQ16602 461 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 COA7Q96BR5 231 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 SLIT3O75094 1523 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 RASSF7Q02833 373 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 KIF22Q14807 665 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 ALX1Q15699 326 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 NLRX1Q86UT6 975 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 FBXO18Q8NFZ0 1043 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 TMEM47Q9BQJ4 181 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 OSBPP22059 807 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 PRR16Q569H4 304 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 MCF2L2Q86YR7 1114 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 RGS12O14924 1447 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 RGL2O15211 777 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CASQ1P31415 396 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 FAM193AP78312 1265 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CCNA1P78396 465 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CXCL9Q07325 125 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 CACNA2D4Q7Z3S7 1137 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 DPP9Q86TI2 863 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 NOSTRINQ8IVI9 506 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 ZNF70Q9UC06 446 aaPredicted RBP11.97□□□□□ -0.49
CARMIL3-202ENST00000559694 PLCD1P51178 756 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 SNAP25P60880 206 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 UBXN2AP68543 259 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 ARHGAP29Q52LW3 1261 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 C12orf60Q5U649 245 aa11.96□□□□□ -0.49
CARMIL3-202ENST00000559694 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms