RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 VPS54Q9P1Q0 977 aa20.09■□□□□ 0.81
CHRNA3-206ENST00000559658 SLC16A2P36021 539 aa20.08■□□□□ 0.81
CHRNA3-206ENST00000559658 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.81
CHRNA3-206ENST00000559658 SLFN13Q68D06 897 aa20.08■□□□□ 0.81
CHRNA3-206ENST00000559658 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.81
CHRNA3-206ENST00000559658 ZNF341Q9BYN7 854 aa20.08■□□□□ 0.81
CHRNA3-206ENST00000559658 IQCA1LA6NCM1 817 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 F5H6K3 240 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 ADAMTS3O15072 1205 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 KLRC3Q07444 240 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 MCTP1Q6DN14 999 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 CLEC17AQ6ZS10 378 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 GDPD2Q9HCC8 539 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 ZNF112Q9UJU3 913 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 ASNSP08243 561 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 MCM4P33991 863 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 DNM1Q05193 864 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 DCAF15Q66K64 600 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 TYW1BQ6NUM6 668 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 ZNF526Q8TF50 670 aaPredicted RBP20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 KLRG1Q96E93 195 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
CHRNA3-206ENST00000559658 CTNND1O60716 968 aaKnown RBP20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 ASPRV1Q53RT3 343 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 MOB2Q70IA6 237 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 HOMER1Q86YM7 354 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 GMCL1P1Q8NEA9 526 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 CDCA5Q96FF9 252 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 SPZ1Q9BXG8 430 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
CHRNA3-206ENST00000559658 SLC1A4P43007 532 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 PIGSQ96S52 555 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 RRAGCQ9HB90 399 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 ARHGEF10LQ9HCE6 1279 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 TMX2Q9Y320 296 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 USP2O75604 605 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 SCG2P13521 617 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 GNAQP50148 359 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 KIF23Q02241 960 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 PFKFB3Q16875 520 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 ZC3H15Q8WU90 426 aaKnown RBP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 FTOQ9C0B1 505 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 NMRK2Q9NPI5 230 aa20.05■□□□□ 0.8
CHRNA3-206ENST00000559658 NPY5RQ15761 445 aa20.04■□□□□ 0.8
CHRNA3-206ENST00000559658 PPP4R3BQ5MIZ7 849 aa20.04■□□□□ 0.8
CHRNA3-206ENST00000559658 WWC2Q6AWC2 1192 aa20.04■□□□□ 0.8
CHRNA3-206ENST00000559658 GBP4Q96PP9 640 aa20.04■□□□□ 0.8
CHRNA3-206ENST00000559658 TRAF5O00463 557 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 DCAF4Q8WV16 495 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 PPP1R11O60927 126 aaPredicted RBP20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 MMP1P03956 469 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 SNAP25P60880 206 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 ADGRF4Q8IZF3 695 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 WASF1Q92558 559 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 GMCL1Q96IK5 515 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 JMJD4Q9H9V9 463 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
CHRNA3-206ENST00000559658 TAL1P17542 331 aaPredicted RBP20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 PTPRAP18433 802 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 NR5A1Q13285 461 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 NOM1Q5C9Z4 860 aaKnown RBP20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 PHF20Q9BVI0 1012 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 VCPKMTQ9H867 229 aa20.02■□□□□ 0.8
CHRNA3-206ENST00000559658 BTBD18B2RXH4 712 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 MTMR2Q13614 643 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 VGLL4Q14135 290 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 HEATR3Q7Z4Q2 680 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 PNMA8AQ86V59 439 aaPredicted RBP20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 HOOK2Q96ED9 719 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 FEZ1Q99689 392 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 LZTS2Q9BRK4 669 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 SNCAIPQ9Y6H5 919 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 FAM205CA6NFA0 338 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 STXBP3O00186 592 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 FIBPO43427 364 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 BMP3P12645 472 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 TRIM29Q14134 588 aa20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 TFIP11Q9UBB9 837 aaKnown RBP20.01■□□□□ 0.79
CHRNA3-206ENST00000559658 PTPRFP10586 1907 aa20■□□□□ 0.79
CHRNA3-206ENST00000559658 TMEM232C9JQI7 657 aa20■□□□□ 0.79
CHRNA3-206ENST00000559658 EARS2Q5JPH6 523 aaKnown RBP20■□□□□ 0.79
CHRNA3-206ENST00000559658 CLMNQ96JQ2 1002 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms