RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, human

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX1-215	ENST00000559240	GOLGA8A	A7E2F4	631 aa		18.84	■□□□□ 0.61
PBX1-215	ENST00000559240	IFNAR1	P17181	557 aa		18.84	■□□□□ 0.61
PBX1-215	ENST00000559240	SMARCA1	P28370	1054 aa		18.84	■□□□□ 0.61
PBX1-215	ENST00000559240	GUCY1A2	P33402	732 aa		18.84	■□□□□ 0.61
PBX1-215	ENST00000559240	DCAF8L1	A6NGE4	600 aa		18.83	■□□□□ 0.61
PBX1-215	ENST00000559240	SNHG28	P0DPA3	235 aa		18.83	■□□□□ 0.61
PBX1-215	ENST00000559240	NUCB2	P80303	420 aa		18.83	■□□□□ 0.61
PBX1-215	ENST00000559240	GRM4	Q14833	912 aa		18.83	■□□□□ 0.61
PBX1-215	ENST00000559240	CPLX2	Q6PUV4	134 aa	Known RBP	18.83	■□□□□ 0.61
PBX1-215	ENST00000559240	GYS2	P54840	703 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	RTN1	Q16799	776 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	PNMA1	Q8ND90	353 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	PDC	P20941	246 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	CAP2	P40123	477 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	MYCBP	Q99417	103 aa	Predicted RBP	18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	LZTS2	Q9BRK4	669 aa		18.83	■□□□□ 0.6
PBX1-215	ENST00000559240	IRF6	O14896	467 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	STK3	Q13188	491 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	SUPT20HL1	Q3ZLR7	823 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	DCPS	Q96C86	337 aa	Known RBP	18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	ZNF341	Q9BYN7	854 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	CABP5	Q9NP86	173 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	CTNND1	O60716	968 aa	Known RBP	18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	CDC27	P30260	824 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	KIF5B	P33176	963 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	GNAQ	P50148	359 aa		18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	RRP1B	Q14684	758 aa	Known RBP	18.82	■□□□□ 0.6
PBX1-215	ENST00000559240	GJB2	P29033	226 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	NOP2	P46087	812 aa	Known RBP	18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	NOL9	Q5SY16	702 aa	Known RBP	18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	MICU3	Q86XE3	530 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	CDAN1	Q8IWY9	1227 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	GMCL1P1	Q8NEA9	526 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	ANKRD7	Q92527	254 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	POLR2A	P24928	1970 aa	Known RBP	18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	CCT2	P78371	535 aa	Known RBP	18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	RAD51AP2	Q09MP3	1159 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	FUT2	Q10981	343 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	ZSCAN23	Q3MJ62	389 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	RNF214	Q8ND24	703 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	ZBTB21	Q9ULJ3	1066 aa		18.81	■□□□□ 0.6
PBX1-215	ENST00000559240	PTPDC1	A2A3K4	754 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	NBPF11	Q86T75	865 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	PHIP	Q8WWQ0	1821 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	PALM3	A6NDB9	673 aa	Predicted RBP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	FMNL1	O95466	1100 aa	Predicted RBP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	RAB3GAP1	Q15042	981 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	TMTC3	Q6ZXV5	915 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	SIAH1	Q8IUQ4	282 aa		18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	FAM177A1	Q8N128	213 aa	Predicted RBP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	CTCFL	Q8NI51	663 aa	Predicted RBP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	NCOA5	Q9HCD5	579 aa	Known RBP	18.8	■□□□□ 0.6
PBX1-215	ENST00000559240	ASNS	P08243	561 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	HNRNPH2	P55795	449 aa	Known RBP	18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	RNF26	Q9BY78	433 aa	Predicted RBP	18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	RBM27	Q9P2N5	1060 aa	Known RBP	18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	FAM196B	A6NMK8	535 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	RIOK3	O14730	519 aa	Known RBP	18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	CPLX1	O14810	134 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	STX8	Q9UNK0	236 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	OTOF	Q9HC10	1997 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	BRD1	O95696	1058 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	KLHL40	Q2TBA0	621 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	ASPRV1	Q53RT3	343 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	CLEC17A	Q6ZS10	378 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	SULF1	Q8IWU6	871 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	MAD2L2	Q9UI95	211 aa		18.79	■□□□□ 0.6
PBX1-215	ENST00000559240	GH2	P01242	217 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	FDPS	P14324	419 aa	Known RBP	18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	ADD1	P35611	737 aa	Known RBP	18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	JAG1	P78504	1218 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	ICA1	Q05084	483 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	DCAF4	Q8WV16	495 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	CEP83	Q9Y592	693 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	UNCX	A6NJT0	531 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	SEPT2	Q15019	361 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	WASF1	Q92558	559 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	GMCL1	Q96IK5	515 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	MYL10	Q9BUA6	226 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	MYH6	P13533	1939 aa		18.78	■□□□□ 0.6
PBX1-215	ENST00000559240	MPHOSPH10	O00566	681 aa	Known RBP	18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	PRPF3	O43395	683 aa	Known RBP	18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	SLURP2	P0DP57	97 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	MAP3K11	Q16584	847 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	NCAPG	Q9BPX3	1015 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	SPZ1	Q9BXG8	430 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	TMX2	Q9Y320	296 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	WDR33	Q9C0J8	1336 aa	Known RBP	18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	JAK2	O60674	1132 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	EEF2	P13639	858 aa	Known RBP	18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	ZNF445	P59923	1031 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	SH2D4A	Q9H788	454 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	CLIP2	Q9UDT6	1046 aa		18.77	■□□□□ 0.6
PBX1-215	ENST00000559240	PDHB	P11177	359 aa		18.76	■□□□□ 0.59
PBX1-215	ENST00000559240	VEGFA	P15692	232 aa	Predicted RBP	18.76	■□□□□ 0.59
PBX1-215	ENST00000559240	ARHGEF10L	Q9HCE6	1279 aa		18.76	■□□□□ 0.59
PBX1-215	ENST00000559240	CNTNAP5	Q8WYK1	1306 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms