RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 LAMB1P07942 1786 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 ERICH4A6NGS2 130 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 LRRC10BA6NIK2 292 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 RNF225M0QZC1 329 aaPredicted RBP18.76■□□□□ 0.59
SPG11-215ENST00000559193 CDC25AP30304 524 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 PAK1Q13153 545 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 CELF1Q92879 486 aaKnown RBP18.76■□□□□ 0.59
SPG11-215ENST00000559193 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 N4BP3O15049 544 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 COPB1P53618 953 aaKnown RBP18.75■□□□□ 0.59
SPG11-215ENST00000559193 DDB1Q16531 1140 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 ZNF569Q5MCW4 686 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 FBXO33Q7Z6M2 555 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 VPS16Q9H269 839 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 ABHD10Q9NUJ1 306 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 TAB2Q9NYJ8 693 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 CDC23Q9UJX2 597 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 CASZ1Q86V15 1759 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 POLR3GO15318 223 aaPredicted RBP18.75■□□□□ 0.59
SPG11-215ENST00000559193 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
SPG11-215ENST00000559193 NELFBQ8WX92 580 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 PYM1Q9BRP8 204 aaKnown RBP18.75■□□□□ 0.59
SPG11-215ENST00000559193 FUT8Q9BYC5 575 aa18.75■□□□□ 0.59
SPG11-215ENST00000559193 TAF3Q5VWG9 929 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 C4orf32Q8N8J7 132 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
SPG11-215ENST00000559193 TTF2Q9UNY4 1162 aaKnown RBP18.74■□□□□ 0.59
SPG11-215ENST00000559193 ROBO1Q9Y6N7 1651 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 ABL1P00519 1130 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 TCP11X2Q5H9J9 407 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
SPG11-215ENST00000559193 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 TMTC1Q8IUR5 882 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 SLC35F6Q8N357 371 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 CRNKL1Q9BZJ0 848 aaKnown RBP18.74■□□□□ 0.59
SPG11-215ENST00000559193 MYH13Q9UKX3 1938 aa18.74■□□□□ 0.59
SPG11-215ENST00000559193 KCNJ18B7U540 433 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 RPN1P04843 607 aaKnown RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 OAS2P29728 719 aaKnown RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 SPAG1Q07617 926 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 KCNJ12Q14500 433 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 JAKMIP3Q5VZ66 844 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 ANKZF1Q9H8Y5 726 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 GDAQ9Y2T3 454 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 BAZ2BQ9UIF8 2168 aaKnown RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 CCDC66A2RUB6 948 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 CCDC151A5D8V7 595 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 SMC1AQ14683 1233 aaKnown RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 ARL6IP4Q66PJ3 421 aaKnown RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
SPG11-215ENST00000559193 ATP8A2Q9NTI2 1148 aa18.73■□□□□ 0.59
SPG11-215ENST00000559193 ADAMTS2O95450 1211 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 PRDX5P30044 214 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 LONP1P36776 959 aaKnown RBP18.72■□□□□ 0.59
SPG11-215ENST00000559193 ARHGAP25P42331 645 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 LONRF2Q1L5Z9 754 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 CEP112Q8N8E3 955 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 CTAGE9A4FU28 777 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
SPG11-215ENST00000559193 BRD3Q15059 726 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 KIF4BQ2VIQ3 1234 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
SPG11-215ENST00000559193 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
SPG11-215ENST00000559193 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 SPATA31A1Q5TZJ5 1347 aa18.72■□□□□ 0.59
SPG11-215ENST00000559193 TSPY2A6NKD2 308 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 PRCPP42785 496 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 TRIM14Q14142 442 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 BLIDQ8IZY5 108 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
SPG11-215ENST00000559193 ZCCHC17Q9NP64 241 aaKnown RBP18.71■□□□□ 0.59
SPG11-215ENST00000559193 PDS5AQ29RF7 1337 aaKnown RBP18.71■□□□□ 0.59
SPG11-215ENST00000559193 RASGRP4Q8TDF6 673 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
SPG11-215ENST00000559193 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.58
SPG11-215ENST00000559193 CALML3P27482 149 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 STAT6P42226 847 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 IRF2BP1Q8IU81 584 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 ANKRD20A12PQ8NF67 263 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 KIF5BP33176 963 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 KRT9P35527 623 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 TUBB2AQ13885 445 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 NAALADL2Q58DX5 795 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 MSANTD4Q8NCY6 345 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 PNKPQ96T60 521 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 TUBB2BQ9BVA1 445 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 DISC1Q9NRI5 854 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 MYH8P13535 1937 aa18.7■□□□□ 0.58
SPG11-215ENST00000559193 MAST2Q6P0Q8 1798 aa18.69■□□□□ 0.58
SPG11-215ENST00000559193 TRIM49BA6NDI0 452 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms