RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 DHX32Q7L7V1 743 aaKnown RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 PRRT2Q7Z6L0 340 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 ZNF444Q8N0Y2 327 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 OTUD5Q96G74 571 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 CHAMP1Q96JM3 812 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MAP3K14Q99558 947 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MKNK2Q9HBH9 465 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 GDPD2Q9HCC8 539 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 SAGE1Q9NXZ1 904 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 IGKV6D-41A0A0C4DH26 115 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 USP17L5A8MUK1 530 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 TRPA1O75762 1119 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 GDF11O95390 407 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 GTF2A2P52657 109 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 CAP1Q01518 475 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 TOB2Q14106 344 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-211ENST00000558890 PPP2R5BQ15173 497 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 CERKLQ49MI3 558 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-211ENST00000558890 NOM1Q5C9Z4 860 aaKnown RBP8.91□□□□□ -0.98
LRRC28-211ENST00000558890 RCSD1Q6JBY9 416 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 Q6ZUG5 572 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 SGMS1Q86VZ5 419 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 FAM184AQ8NB25 1140 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 GTF3C6Q969F1 213 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 MKL1Q969V6 931 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 TCEANC2Q96MN5 208 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 LLPHQ9BRT6 129 aaKnown RBP8.91□□□□□ -0.98
LRRC28-211ENST00000558890 RBSNQ9H1K0 784 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 KANSL2Q9H9L4 492 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 AS3MTQ9HBK9 375 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 CABP5Q9NP86 173 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 INCENPQ9NQS7 918 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 NYAP2Q9P242 653 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 ZBTB21Q9ULJ3 1066 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 HTTP42858 3142 aa8.91□□□□□ -0.98
LRRC28-211ENST00000558890 NEDD4P46934 1319 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ADGRA2Q96PE1 1338 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CCL15-CCL14A0A0B4J2E2 113 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 A0A1W2PRG0 241 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ERICH2A1L162 156 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 TSPY2A6NKD2 308 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ESPNB1AK53 854 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 PITPNM1O00562 1244 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CA12O43570 354 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 GADD45BO75293 160 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-211ENST00000558890 GH2P01242 217 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 TSPY3P0CV98 308 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 TSPY8P0CW00 308 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CETPP11597 493 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 AKR1B1P15121 316 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CLCN1P35523 988 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 HMGN5P82970 282 aaKnown RBP8.9□□□□□ -0.98
LRRC28-211ENST00000558890 EXOSC10Q01780 885 aaKnown RBP8.9□□□□□ -0.98
LRRC28-211ENST00000558890 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 SPP2Q13103 211 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 STK3Q13188 491 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 SNAPC2Q13487 334 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 CCL15Q16663 113 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ABCB5Q2M3G0 1257 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 STOX1Q6ZVD7 989 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ACER1Q8TDN7 264 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 RRAGDQ9NQL2 400 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-211ENST00000558890 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
LRRC28-211ENST00000558890 ELP1O95163 1332 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 GOLGA6L4A6NEF3 574 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 H3BQV1 296 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 KDM4AO75164 1064 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 TBC1D8O95759 1140 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 TTLL1O95922 423 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 CALM1P0DP23 149 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 CALM2P0DP24 149 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 CALM3P0DP25 149 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 CTCFP49711 727 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-211ENST00000558890 LBX1P52954 281 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 BACE1P56817 501 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 HAND2P61296 217 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 SREBF2Q12772 1141 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 DGKZQ13574 1117 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 SEPT2Q15019 361 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 SEC23AQ15436 765 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 ANKRD23Q86SG2 305 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 BRF1Q92994 677 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 UBAC1Q9BSL1 405 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 SCAND2PQ9GZW5 306 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-211ENST00000558890 ZCCHC17Q9NP64 241 aaKnown RBP8.89□□□□□ -0.99
LRRC28-211ENST00000558890 PRDM10Q9NQV6 1147 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 MTMR4Q9NYA4 1195 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-211ENST00000558890 ZSWIM5Q9P217 1185 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 TSKSQ9UJT2 592 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms