RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ADAMTS5Q9UNA0 930 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 BAZ2AQ9UIF9 1905 aaKnown RBP13.81□□□□□ -0.2
CASC4-205ENST00000558735 TTC28Q96AY4 2481 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 MUC3AQ02505 3323 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 M0R2C6 588 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 GPAA1O43292 621 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 COBLO75128 1261 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 FLOT1O75955 427 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 RASA1P20936 1047 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 CYP2C19P33261 490 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 DPP9Q86TI2 863 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 MB21D1Q8N884 522 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 SHCBP1Q8NEM2 672 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 SENP6Q9GZR1 1112 aaPredicted RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 SH2D4AQ9H788 454 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
CASC4-205ENST00000558735 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 DDX20Q9UHI6 824 aaKnown RBP13.8□□□□□ -0.2
CASC4-205ENST00000558735 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
CASC4-205ENST00000558735 ADORA2AP29274 412 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 PLS1Q14651 629 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 TMEM132BQ14DG7 1078 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
CASC4-205ENST00000558735 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
CASC4-205ENST00000558735 SEMA6BQ9H3T3 888 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 EPB41L4AQ9HCS5 686 aaPredicted RBP13.79□□□□□ -0.2
CASC4-205ENST00000558735 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 RLFQ13129 1914 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 TTC41PQ6P2S7 1318 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 CDH23Q9H251 3354 aa13.79□□□□□ -0.2
CASC4-205ENST00000558735 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
CASC4-205ENST00000558735 SMAD3P84022 425 aaKnown RBP13.78□□□□□ -0.2
CASC4-205ENST00000558735 SNX17Q15036 470 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 MROH8Q9H579 483 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 NYAP2Q9P242 653 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
CASC4-205ENST00000558735 VWA5AO00534 786 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 ERC2O15083 957 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 APPP05067 770 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 GNAT2P19087 354 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 CNGA1P29973 690 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 RTP1P59025 263 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 FAM83BQ5T0W9 1011 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 OLFML2BQ68BL8 750 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 ABRAQ8N0Z2 381 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 MAFAQ8NHW3 353 aaPredicted RBP13.77□□□□□ -0.21
CASC4-205ENST00000558735 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 GOPCQ9HD26 462 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 PRKAG2Q9UGJ0 569 aa13.77□□□□□ -0.21
CASC4-205ENST00000558735 LTBP2Q14767 1821 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 F5H6K3 240 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 RAD21O60216 631 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 SLC25A27O95847 323 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 CYBAP13498 195 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 STAT3P40763 770 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 KLRC3Q07444 240 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 SHHQ15465 462 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 ZMYM1Q5SVZ6 1142 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 RIOX2Q8IUF8 465 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 ZNF444Q8N0Y2 327 aaPredicted RBP13.76□□□□□ -0.21
CASC4-205ENST00000558735 ARRDC4Q8NCT1 418 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
CASC4-205ENST00000558735 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 MYH7P12883 1935 aa13.76□□□□□ -0.21
CASC4-205ENST00000558735 PRDM1O75626 825 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 FCER1AP12319 257 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 MX1P20591 662 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 TDO2P48775 406 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
CASC4-205ENST00000558735 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
CASC4-205ENST00000558735 SLC39A5Q6ZMH5 540 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 MKL1Q969V6 931 aa13.75□□□□□ -0.21
CASC4-205ENST00000558735 TTYH1Q9H313 450 aaPredicted RBP13.75□□□□□ -0.21
CASC4-205ENST00000558735 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
CASC4-205ENST00000558735 ROBO3Q96MS0 1386 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
CASC4-205ENST00000558735 MAML3Q96JK9 1138 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
CASC4-205ENST00000558735 SLC5A4Q9NY91 659 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms