RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 PAK2Q13177 524 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 GCKRQ14397 625 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 TTF1Q15361 905 aaPredicted RBP18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 CCDC47Q96A33 483 aaKnown RBP18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 TMEM87BQ96K49 555 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
HMBOX1-212ENST00000558662 NEURL1BA8MQ27 555 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 RWDD2BP57060 319 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 LMNB2Q03252 620 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 SPECC1Q5M775 1068 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 WHAMMQ8TF30 809 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 ARL8AQ96BM9 186 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 ATP6V1G3Q96LB4 118 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 KDM4CQ9H3R0 1056 aa18.08■□□□□ 0.48
HMBOX1-212ENST00000558662 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 C5orf60A6NFR6 353 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 TACC1O75410 805 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 ABL1P00519 1130 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 IDEP14735 1019 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 HERVK_113P62684 666 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 FAM210AQ96ND0 272 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 GSTA1P08263 222 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 PAFAH1B1P43034 410 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 TBC1D8BQ0IIM8 1120 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 IFT88Q13099 833 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 TCP11X2Q5H9J9 407 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 CHST3Q7LGC8 479 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 CREG2Q8IUH2 290 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 APLFQ8IW19 511 aaPredicted RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 ZNF483Q8TF39 744 aaPredicted RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 ANKRD27Q96NW4 1050 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 ZIM3Q96PE6 472 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 HDAC6Q9UBN7 1215 aa18.07■□□□□ 0.48
HMBOX1-212ENST00000558662 H7C1D1 291 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 IGKV5-2P06315 115 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 ANTXR2P58335 489 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 KIF5AQ12840 1032 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 DPYDQ12882 1025 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 BIRC2Q13490 618 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 RBBP5Q15291 538 aaKnown RBP18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 ZNF827Q17R98 1081 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 SPATA4Q8NEY3 305 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 CYFIP2Q96F07 1278 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 CENPHQ9H3R5 247 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 EBF2Q9HAK2 575 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 RMND1Q9NWS8 449 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 TPX2Q9ULW0 747 aaKnown RBP18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 HYOU1Q9Y4L1 999 aa18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
HMBOX1-212ENST00000558662 GMNCA6NCL1 334 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 GOLGA6L10A6NI86 522 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 ENC1O14682 589 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 PAEPP09466 180 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 BIRC3Q13489 604 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 NOC3LQ8WTT2 800 aaKnown RBP18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 FERMT2Q96AC1 680 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 CAPZA3Q96KX2 299 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 JADE2Q9NQC1 790 aa18.05■□□□□ 0.48
HMBOX1-212ENST00000558662 PDE2AO00408 941 aaPredicted RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 MMP1P03956 469 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 EEF1GP26641 437 aaKnown RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 SSRP1Q08945 709 aaKnown RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 SGMS1Q86VZ5 419 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 GDF3Q9NR23 364 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 ETAA1Q9NY74 926 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 MYH7P12883 1935 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 ZNF213O14771 459 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 FMNL1O95466 1100 aaPredicted RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 PRPHP41219 470 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 C2orf54Q08AI8 447 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 TRAF1Q13077 416 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 PAK1Q13153 545 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 NAA25Q14CX7 972 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 GSPT2Q8IYD1 628 aaKnown RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 TSEN2Q8NCE0 465 aaKnown RBP18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 SAAL1Q96ER3 474 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 GDAP1L1Q96MZ0 367 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 ALS2CR12Q96Q35 445 aa18.04■□□□□ 0.48
HMBOX1-212ENST00000558662 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
HMBOX1-212ENST00000558662 CFAP73A6NFT4 308 aa18.03■□□□□ 0.48
HMBOX1-212ENST00000558662 LGALS16A8MUM7 142 aa18.03■□□□□ 0.48
HMBOX1-212ENST00000558662 KCNJ18B7U540 433 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms