RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CABP4P57796 275 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 IGBP1P78318 339 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
MARK3-213ENST00000558611 FBXO27Q8NI29 283 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 FERD3LQ96RJ6 166 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 PCDHB5Q9Y5E4 795 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 CILPO75339 1184 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 IMPDH2P12268 514 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 CD33P20138 364 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 BMP6P22004 513 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 NME2P22392 152 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 MCM4P33991 863 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 LRRC14Q15048 493 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 DBN1Q16643 649 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
MARK3-213ENST00000558611 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 RBSNQ9H1K0 784 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 ATG3Q9NT62 314 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 ACTR10Q9NZ32 417 aa12.73□□□□□ -0.37
MARK3-213ENST00000558611 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
MARK3-213ENST00000558611 GHRHP01286 108 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
MARK3-213ENST00000558611 PTSQ03393 145 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 DDR2Q16832 855 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 RBBP8NLQ8NC74 664 aaPredicted RBP12.72□□□□□ -0.37
MARK3-213ENST00000558611 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 ZNRF3Q9ULT6 936 aa12.72□□□□□ -0.37
MARK3-213ENST00000558611 PNPLA7Q6ZV29 1317 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 J3QW42 95 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 B3GALT4O96024 378 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 ATP11AP98196 1134 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 CELF2-AS1Q8N7Q2 184 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
MARK3-213ENST00000558611 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
MARK3-213ENST00000558611 PRKRIP1Q9H875 184 aaPredicted RBP12.71□□□□□ -0.37
MARK3-213ENST00000558611 SLC52A2Q9HAB3 445 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
MARK3-213ENST00000558611 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
MARK3-213ENST00000558611 LAMB4A4D0S4 1761 aa12.71□□□□□ -0.38
MARK3-213ENST00000558611 GNAT3A8MTJ3 354 aa12.7□□□□□ -0.38
MARK3-213ENST00000558611 SMNDC1O75940 238 aaKnown RBP eCLIP12.7□□□□□ -0.38
MARK3-213ENST00000558611 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
MARK3-213ENST00000558611 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
MARK3-213ENST00000558611 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
MARK3-213ENST00000558611 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
MARK3-213ENST00000558611 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 CCDC85CA6NKD9 419 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
MARK3-213ENST00000558611 ITPK1Q13572 414 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 RASGRF1Q13972 1273 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 PLD4Q96BZ4 506 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
MARK3-213ENST00000558611 PDPK1O15530 556 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 CDC45O75419 566 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 BPNT1O95861 308 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 ZNF157P51786 506 aaPredicted RBP12.68□□□□□ -0.38
MARK3-213ENST00000558611 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 LLGL2Q6P1M3 1020 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 APPBP2Q92624 585 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 MTFR1LQ9H019 292 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 BRMS1Q9HCU9 246 aa12.68□□□□□ -0.38
MARK3-213ENST00000558611 AXIN1O15169 862 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 DGAT1O75907 488 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 FGFR3P22607 806 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 CASP7P55210 303 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 ANAPC15P60006 121 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
MARK3-213ENST00000558611 SEPT6Q14141 434 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 FXNQ16595 210 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 HFE2Q6ZVN8 426 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 LILRB2Q8N423 598 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 PLEKHF1Q96S99 279 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 SLKQ9H2G2 1235 aaPredicted RBP12.67□□□□□ -0.38
MARK3-213ENST00000558611 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 IFT57Q9NWB7 429 aa12.67□□□□□ -0.38
MARK3-213ENST00000558611 DNAJC6O75061 913 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 NEFMP07197 916 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 ARNTP27540 789 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 TEFQ10587 303 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms