RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PHF20Q9BVI0 1012 aa23.55■■□□□ 1.36
SNRPA1-205ENST00000558036 CLIC4Q9Y696 253 aa23.55■■□□□ 1.36
SNRPA1-205ENST00000558036 ELP1O95163 1332 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 MBD3O95983 291 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 LZTS2Q9BRK4 669 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 ISY1Q9ULR0 285 aaKnown RBP23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 GSE1Q14687 1217 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 CCDC96Q2M329 555 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 PRAMEF18Q5VWM3 479 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 TTBK2Q6IQ55 1244 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 NOSTRINQ8IVI9 506 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 MKL1Q969V6 931 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 SPZ1Q9BXG8 430 aa23.54■■□□□ 1.36
SNRPA1-205ENST00000558036 MYH6P13533 1939 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 DICER1Q9UPY3 1922 aaKnown RBP23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 ADAMTS3O15072 1205 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 TBC1D12O60347 775 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 ZNF543Q08ER8 600 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 ASPRV1Q53RT3 343 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 TYW1BQ6NUM6 668 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 A0A1W2PRG0 241 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 NPY5RQ15761 445 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 HEATR3Q7Z4Q2 680 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 PGBD1Q96JS3 809 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 PIGSQ96S52 555 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 TMEM63CQ9P1W3 806 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 ZBTB21Q9ULJ3 1066 aa23.53■■□□□ 1.36
SNRPA1-205ENST00000558036 SLC16A2P36021 539 aa23.52■■□□□ 1.36
SNRPA1-205ENST00000558036 PPP4R3BQ5MIZ7 849 aa23.52■■□□□ 1.36
SNRPA1-205ENST00000558036 WWC2Q6AWC2 1192 aa23.52■■□□□ 1.36
SNRPA1-205ENST00000558036 FOXP1Q9H334 677 aaPredicted RBP23.52■■□□□ 1.36
SNRPA1-205ENST00000558036 ECE1P42892 770 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 GPR162Q16538 588 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 NBPF12Q5TAG4 269 aaPredicted RBP23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 CCDC84Q86UT8 332 aaPredicted RBP23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 GGA3Q9NZ52 723 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 RCOR1Q9UKL0 485 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 FAM205CA6NFA0 338 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 NLRP5P59047 1200 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 NOM1Q5C9Z4 860 aaKnown RBP23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 SLFN13Q68D06 897 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 ATL3Q6DD88 541 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 NUP88Q99567 741 aaPredicted RBP23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 MYH15Q9Y2K3 1946 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 MYH4Q9Y623 1939 aa23.51■■□□□ 1.35
SNRPA1-205ENST00000558036 F5H6K3 240 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 KRT2P35908 639 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 CAP2P40123 477 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 MAP3K10Q02779 954 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 KLRC3Q07444 240 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 EARS2Q5JPH6 523 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 ACER1Q8TDN7 264 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 SLC1A4P43007 532 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 RIOX1Q9H6W3 641 aa23.5■■□□□ 1.35
SNRPA1-205ENST00000558036 GOLGA6L4A6NEF3 574 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 ANO1Q5XXA6 986 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 SPICE1Q8N0Z3 855 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 LINC00301Q8NCQ3 95 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 POLR3EQ9NVU0 708 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 FZD1Q9UP38 647 aa23.49■■□□□ 1.35
SNRPA1-205ENST00000558036 PHF20L1A8MW92 1017 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 TOB1P50616 345 aaPredicted RBP23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 SF3A1Q15459 793 aaKnown RBP23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 ADGRF4Q8IZF3 695 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 BARHL2Q9NY43 387 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 SEC63Q9UGP8 760 aaKnown RBP23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 STXBP3O00186 592 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 NDUFB10O96000 172 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 ME1P48163 572 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 STK38Q15208 465 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 ZSCAN23Q3MJ62 389 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 GPATCH4Q5T3I0 446 aaKnown RBP23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 JMJD4Q9H9V9 463 aa23.48■■□□□ 1.35
SNRPA1-205ENST00000558036 ATP2B1P20020 1258 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 SMARCA1P28370 1054 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 NASPP49321 788 aaPredicted RBP23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 GLIS2Q9BZE0 524 aaPredicted RBP23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 LIG1P18858 919 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 KIAA1755Q5JYT7 1200 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 GMCL1P1Q8NEA9 526 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 BRMS1Q9HCU9 246 aa23.47■■□□□ 1.35
SNRPA1-205ENST00000558036 USP17L10C9JJH3 530 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 ZYXQ15942 572 aaKnown RBP23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 BICD2Q8TD16 824 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 RASGRP4Q8TDF6 673 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 DCAF4Q8WV16 495 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 TNFRSF25Q93038 417 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 ARHGEF10LQ9HCE6 1279 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 SH3GLB2Q9NR46 395 aa23.46■■□□□ 1.35
SNRPA1-205ENST00000558036 MARCKSP29966 332 aaPredicted RBP23.45■■□□□ 1.34
SNRPA1-205ENST00000558036 NAPAP54920 295 aa23.45■■□□□ 1.34
SNRPA1-205ENST00000558036 PCDHA7Q9UN72 937 aa23.45■■□□□ 1.34
SNRPA1-205ENST00000558036 SPTLC2O15270 562 aa23.44■■□□□ 1.34
SNRPA1-205ENST00000558036 YEATS4O95619 227 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms