RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 SHC4Q6S5L8 630 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 TNFRSF25Q93038 417 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 VPS54Q9P1Q0 977 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 SAP30BPQ9UHR5 308 aaKnown RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 CALML3P27482 149 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 MARCKSP29966 332 aaPredicted RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 SYKP43405 635 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 TRAPPC10P48553 1259 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 ZNF165P49910 485 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 NR5A1Q13285 461 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 STRIP1Q5VSL9 837 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 MSL1Q68DK7 614 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 SLC44A5Q8NCS7 719 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 C7orf43Q8WVR3 580 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 TMEM47Q9BQJ4 181 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 SWAP70Q9UH65 585 aa9.85□□□□□ -0.83
NEMF-215ENST00000557380 TTF2Q9UNY4 1162 aaKnown RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 SRPRBQ9Y5M8 271 aaKnown RBP9.85□□□□□ -0.83
NEMF-215ENST00000557380 USP17L3A6NCW0 530 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 USP17L4A6NCW7 530 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 TRIM75PA6NK02 468 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 TOP1P11387 765 aaKnown RBP9.84□□□□□ -0.83
NEMF-215ENST00000557380 IQCB1Q15051 598 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 EZH2Q15910 746 aaKnown RBP9.84□□□□□ -0.83
NEMF-215ENST00000557380 GALNT17Q6IS24 598 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 USP17L1Q7RTZ2 530 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 TEKT1Q969V4 418 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 ZDHHC15Q96MV8 337 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 BPIFA3Q9BQP9 254 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 MAD2L2Q9UI95 211 aa9.84□□□□□ -0.83
NEMF-215ENST00000557380 FBXO2Q9UK22 296 aaPredicted RBP9.84□□□□□ -0.83
NEMF-215ENST00000557380 ZNF646O15015 1829 aaPredicted RBP9.84□□□□□ -0.83
NEMF-215ENST00000557380 TPM3P06753 285 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 APOBEC3HQ6NTF7 200 aaKnown RBP9.83□□□□□ -0.84
NEMF-215ENST00000557380 LUZP1Q86V48 1076 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 NAT10Q9H0A0 1025 aaKnown RBP9.83□□□□□ -0.84
NEMF-215ENST00000557380 EHD4Q9H223 541 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 CABP5Q9NP86 173 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 TUBE1Q9UJT0 475 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 ZKSCAN5Q9Y2L8 839 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 PCDHB6Q9Y5E3 794 aa9.83□□□□□ -0.84
NEMF-215ENST00000557380 IGKV6D-41A0A0C4DH26 115 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 AP5Z1O43299 807 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 NLRP5P59047 1200 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 SLC4A8Q2Y0W8 1093 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 PPP4R3BQ5MIZ7 849 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 DACT2Q5SW24 774 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 CDC42EP5Q6NZY7 148 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 SARM1Q6SZW1 724 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 CEP57L1Q8IYX8 460 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 DAGLBQ8NCG7 672 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 FERMT2Q96AC1 680 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 USP40Q9NVE5 1235 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 KCNH3Q9ULD8 1083 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 ZNF500O60304 480 aaPredicted RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 MSNP26038 577 aaKnown RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 CRKP46108 304 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 NLRP12P59046 1061 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 KIAA2012Q0VF49 1180 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 KHSRPQ92945 711 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■■□□ 16.6
NEMF-215ENST00000557380 CLIC6Q96NY7 704 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 DDX4Q9NQI0 724 aaKnown RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
NEMF-215ENST00000557380 STX8Q9UNK0 236 aa9.82□□□□□ -0.84
NEMF-215ENST00000557380 MYH8P13535 1937 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 GREB1LQ9C091 1923 aaPredicted RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 SCN9AQ15858 1988 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 BAZ2BQ9UIF8 2168 aaKnown RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 hCG_1642624A0A1W2PR95 340 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 F8W031 263 aaPredicted RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 GOLGA6L19H0YKK7 550 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 M0R2N6 131 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 CYTH3O43739 400 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 ECE2O60344 883 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 HLA-DOAP06340 250 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 PTMAP06454 111 aaKnown RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 PARP1P09874 1014 aaKnown RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 CDC25BP30305 580 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 ZRSR1Q15695 479 aaKnown RBP9.81□□□□□ -0.84
NEMF-215ENST00000557380 KRBA2Q6ZNG9 492 aa9.81□□□□□ -0.84
NEMF-215ENST00000557380 C11orf57Q6ZUT1 292 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms