RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 KRTAP10-9P60411 292 aa3.68□□□□□ -1.82
SLIRP-208ENST00000556956 PSMD2Q13200 908 aa3.68□□□□□ -1.82
SLIRP-208ENST00000556956 SSPNQ14714 243 aa3.68□□□□□ -1.82
SLIRP-208ENST00000556956 CCDC85BQ15834 202 aaPredicted RBP3.68□□□□□ -1.82
SLIRP-208ENST00000556956 PCNX4Q63HM2 1172 aa3.68□□□□□ -1.82
SLIRP-208ENST00000556956 CENPQQ7L2Z9 268 aaPredicted RBP3.68□□□□□ -1.82
SLIRP-208ENST00000556956 RPRD2Q5VT52 1461 aaKnown RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 URB2Q14146 1524 aaKnown RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 EHBP1L1Q8N3D4 1523 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 ABCA10Q8WWZ4 1543 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 IGF2BP3O00425 579 aaKnown RBP eCLIP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 BECN1Q14457 450 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 TAF1CQ15572 869 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 ZNF385BQ569K4 471 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 TTBK2Q6IQ55 1244 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 ZNF746Q6NUN9 644 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 C12orf40Q86WS4 652 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 ZFPM1Q8IX07 1006 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 GRIN3AQ8TCU5 1115 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 STK35Q8TDR2 534 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 PANK1Q8TE04 598 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 ISL2Q96A47 359 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 CRBNQ96SW2 442 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 DUSP9Q99956 384 aaKnown RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 DUSP23Q9BVJ7 150 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 CARS2Q9HA77 564 aaKnown RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 PRDM10Q9NQV6 1147 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 TACC3Q9Y6A5 838 aa3.67□□□□□ -1.82
SLIRP-208ENST00000556956 EIF4G3O43432 1585 aaKnown RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 POLA1P09884 1462 aaPredicted RBP3.67□□□□□ -1.82
SLIRP-208ENST00000556956 USP47Q96K76 1375 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 MYOCOSA0A1B0GUC4 107 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 GNAT3A8MTJ3 354 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 DCDC2CA8MYV0 355 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 FBXO24O75426 580 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PAGE1O75459 146 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 LRIG2O94898 1065 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 CYP7A1P22680 504 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 ETF1P62495 437 aaKnown RBP3.66□□□□□ -1.82
SLIRP-208ENST00000556956 RING1Q06587 406 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PDE4BQ07343 736 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PWP1Q13610 501 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 CNGB1Q14028 1251 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-208ENST00000556956 CCDC27Q2M243 656 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PPM1JQ5JR12 505 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 ZBTB37Q5TC79 503 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 HID1Q8IV36 788 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 TMEM151BQ8IW70 566 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 SPACA3Q8IXA5 215 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 MFSD2AQ8NA29 543 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 ABHD4Q8TB40 342 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 COX4I2Q96KJ9 171 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 SETDB2Q96T68 719 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 NOC4LQ9BVI4 516 aaKnown RBP3.66□□□□□ -1.82
SLIRP-208ENST00000556956 MIR1-1HGQ9H1L0 117 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 GCM1Q9NP62 436 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PARP2Q9UGN5 583 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 CSADQ9Y600 493 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 PDS5BQ9NTI5 1447 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 SNAPC4Q5SXM2 1469 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 MRC2Q9UBG0 1479 aa3.66□□□□□ -1.82
SLIRP-208ENST00000556956 UGGT2Q9NYU1 1516 aa3.65□□□□□ -1.82
SLIRP-208ENST00000556956 ADAMTS12P58397 1594 aa3.65□□□□□ -1.82
SLIRP-208ENST00000556956 PRICKLE3O43900 615 aaPredicted RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 SORBS3O60504 671 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 HSP90AA1P07900 732 aaKnown RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 CELA3AP09093 270 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 CAP2P40123 477 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 ST13P50502 369 aaKnown RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 DAB2P98082 770 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 VMACQ2NL98 169 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 TSNAXIP1Q2TAA8 658 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 ZNF326Q5BKZ1 582 aaKnown RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 AGMOQ6ZNB7 445 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 TMC4Q7Z404 712 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 CCDC84Q86UT8 332 aaPredicted RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 TOP6BLQ8N6T0 577 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 HEXIM2Q96MH2 286 aaKnown RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 SGPP1Q9BX95 441 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 CARD11Q9BXL7 1154 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 FOXQ1Q9C009 403 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 WNT10AQ9GZT5 417 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 TNFRSF18Q9Y5U5 241 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 DENND4BO75064 1496 aaPredicted RBP3.65□□□□□ -1.83
SLIRP-208ENST00000556956 GRIN2BQ13224 1484 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 KDM2BQ8NHM5 1336 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 ARHGEF11O15085 1522 aa3.65□□□□□ -1.83
SLIRP-208ENST00000556956 UHRF1BP1Q6BDS2 1440 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 HECW1Q76N89 1606 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 PRAMEF27A3QJZ7 478 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 RRP9O43818 475 aaKnown RBP3.64□□□□□ -1.83
SLIRP-208ENST00000556956 FRAT2O75474 233 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-208ENST00000556956 RTP5Q14D33 572 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 MPRIPQ6WCQ1 1025 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 RELL1Q8IUW5 271 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 PKNOX2Q96KN3 472 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 PRDM5Q9NQX1 630 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-208ENST00000556956 PALD1Q9ULE6 856 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 MAPK8IP1Q9UQF2 711 aa3.64□□□□□ -1.83
SLIRP-208ENST00000556956 TEX14Q8IWB6 1497 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms