RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PLEKHA8P1O95397 391 aa27.54■■■□□ 2
SIX4-203ENST00000556952 PARP1P09874 1014 aaKnown RBP27.54■■■□□ 2
SIX4-203ENST00000556952 SNHG28P0DPA3 235 aa27.54■■■□□ 2
SIX4-203ENST00000556952 ZSCAN22P10073 491 aaPredicted RBP27.54■■■□□ 2
SIX4-203ENST00000556952 ATP2B2Q01814 1243 aa27.54■■■□□ 2
SIX4-203ENST00000556952 FUT2Q10981 343 aa27.54■■■□□ 2
SIX4-203ENST00000556952 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.54■■■□□ 2
SIX4-203ENST00000556952 RASAL3Q86YV0 1011 aa27.54■■■□□ 2
SIX4-203ENST00000556952 MTMR6Q9Y217 621 aa27.54■■■□□ 2
SIX4-203ENST00000556952 PDHBP11177 359 aa27.53■■■□□ 2
SIX4-203ENST00000556952 TNPO1Q92973 898 aaKnown RBP27.53■■■□□ 2
SIX4-203ENST00000556952 WRNIP1Q96S55 665 aa27.53■■■□□ 2
SIX4-203ENST00000556952 ARHGEF10LQ9HCE6 1279 aa27.53■■■□□ 2
SIX4-203ENST00000556952 CNTNAP5Q8WYK1 1306 aa27.53■■■□□ 2
SIX4-203ENST00000556952 VPS37CA5D8V6 355 aaPredicted RBP27.52■■■□□ 2
SIX4-203ENST00000556952 CTNND1O60716 968 aaKnown RBP27.52■■■□□ 2
SIX4-203ENST00000556952 AOC2O75106 756 aa27.52■■■□□ 2
SIX4-203ENST00000556952 PPFIA3O75145 1194 aa27.52■■■□□ 2
SIX4-203ENST00000556952 DEXIO95424 95 aa27.52■■■□□ 2
SIX4-203ENST00000556952 SLC10A3P09131 477 aa27.52■■■□□ 2
SIX4-203ENST00000556952 ASPRV1Q53RT3 343 aa27.52■■■□□ 2
SIX4-203ENST00000556952 ANKRD13AQ8IZ07 590 aa27.52■■■□□ 2
SIX4-203ENST00000556952 RBM27Q9P2N5 1060 aaKnown RBP27.52■■■□□ 2
SIX4-203ENST00000556952 H3BQV1 296 aa27.52■■■□□ 2
SIX4-203ENST00000556952 INPP5BP32019 993 aa27.52■■■□□ 2
SIX4-203ENST00000556952 ECE1P42892 770 aa27.52■■■□□ 2
SIX4-203ENST00000556952 MAP3K9P80192 1104 aa27.52■■■□□ 2
SIX4-203ENST00000556952 AKAP17AQ02040 695 aaKnown RBP27.52■■■□□ 2
SIX4-203ENST00000556952 IFFO2Q5TF58 517 aa27.52■■■□□ 2
SIX4-203ENST00000556952 SIAH1Q8IUQ4 282 aa27.52■■■□□ 2
SIX4-203ENST00000556952 SRBD1Q8N5C6 995 aaKnown RBP27.52■■■□□ 2
SIX4-203ENST00000556952 ZNF112Q9UJU3 913 aa27.52■■■□□ 2
SIX4-203ENST00000556952 PRPF3O43395 683 aaKnown RBP27.51■■□□□ 1.99
SIX4-203ENST00000556952 VGLL4Q14135 290 aa27.51■■□□□ 1.99
SIX4-203ENST00000556952 CMTR1Q8N1G2 835 aaKnown RBP27.51■■□□□ 1.99
SIX4-203ENST00000556952 GMCL1P1Q8NEA9 526 aa27.51■■□□□ 1.99
SIX4-203ENST00000556952 ZKSCAN4Q969J2 545 aaPredicted RBP27.51■■□□□ 1.99
SIX4-203ENST00000556952 ZIC5Q96T25 663 aa27.51■■□□□ 1.99
SIX4-203ENST00000556952 MTMR7Q9Y216 660 aa27.51■■□□□ 1.99
SIX4-203ENST00000556952 SMARCA1P28370 1054 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 STAG2Q8N3U4 1231 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 CCDC82Q8N4S0 544 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 C8orf76Q96K31 380 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 ALG1Q9BT22 464 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 SH2D4AQ9H788 454 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 ELP3Q9H9T3 547 aa27.5■■□□□ 1.99
SIX4-203ENST00000556952 USP17L5A8MUK1 530 aa27.49■■□□□ 1.99
SIX4-203ENST00000556952 GPATCH4Q5T3I0 446 aaKnown RBP27.49■■□□□ 1.99
SIX4-203ENST00000556952 USP17L2Q6R6M4 530 aa27.49■■□□□ 1.99
SIX4-203ENST00000556952 DCAF4Q8WV16 495 aa27.49■■□□□ 1.99
SIX4-203ENST00000556952 CCDC102AQ96A19 550 aa27.49■■□□□ 1.99
SIX4-203ENST00000556952 F13A1P00488 732 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 CLEC17AQ6ZS10 378 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 SPZ1Q9BXG8 430 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 SNCAIPQ9Y6H5 919 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 UNCXA6NJT0 531 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 KLRF2D3W0D1 207 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 ZNF543Q08ER8 600 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 MKRN3Q13064 507 aaKnown RBP27.48■■□□□ 1.99
SIX4-203ENST00000556952 FBXO18Q8NFZ0 1043 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 CNKSR2Q8WXI2 1034 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 SLC10A4Q96EP9 437 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 GBP4Q96PP9 640 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 TMX2Q9Y320 296 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 ATP6V1DQ9Y5K8 247 aa27.48■■□□□ 1.99
SIX4-203ENST00000556952 MYH15Q9Y2K3 1946 aa27.47■■□□□ 1.99
SIX4-203ENST00000556952 RASGRP2Q7LDG7 609 aa27.47■■□□□ 1.99
SIX4-203ENST00000556952 GMCL1Q96IK5 515 aa27.47■■□□□ 1.99
SIX4-203ENST00000556952 CSADQ9Y600 493 aa27.47■■□□□ 1.99
SIX4-203ENST00000556952 GJA5P36382 358 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 TRIM29Q14134 588 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 FOXD4L5Q5VV16 416 aaPredicted RBP27.46■■□□□ 1.99
SIX4-203ENST00000556952 SLFN13Q68D06 897 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 SCYL3Q8IZE3 742 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 JMYQ8N9B5 988 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 FOXD4L4Q8WXT5 416 aaPredicted RBP27.46■■□□□ 1.99
SIX4-203ENST00000556952 GOPCQ9HD26 462 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 PHIPQ8WWQ0 1821 aa27.46■■□□□ 1.99
SIX4-203ENST00000556952 A0A1W2PRG0 241 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 F5H6K3 240 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 GOLGA8HP0CJ92 632 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 KLRC3Q07444 240 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 NOGQ13253 232 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 WNK4Q96J92 1243 aa27.45■■□□□ 1.99
SIX4-203ENST00000556952 V9GY48 417 aaPredicted RBP27.45■■□□□ 1.99
SIX4-203ENST00000556952 SLC1A4P43007 532 aa27.44■■□□□ 1.98
SIX4-203ENST00000556952 PKN1Q16512 942 aa27.44■■□□□ 1.98
SIX4-203ENST00000556952 CCDC96Q2M329 555 aa27.44■■□□□ 1.98
SIX4-203ENST00000556952 SPRYD7Q5W111 196 aa27.44■■□□□ 1.98
SIX4-203ENST00000556952 AIFM3Q96NN9 605 aa27.44■■□□□ 1.98
SIX4-203ENST00000556952 FRMPD2Q68DX3 1309 aaPredicted RBP27.44■■□□□ 1.98
SIX4-203ENST00000556952 XBP1P17861 261 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 FOSBP53539 338 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 NOL9Q5SY16 702 aaKnown RBP27.43■■□□□ 1.98
SIX4-203ENST00000556952 OPTNQ96CV9 577 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 ZSCAN16Q9H4T2 348 aaPredicted RBP27.43■■□□□ 1.98
SIX4-203ENST00000556952 CYTH3O43739 400 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 NDUFB10O96000 172 aa27.43■■□□□ 1.98
SIX4-203ENST00000556952 KIF23Q02241 960 aaPredicted RBP27.43■■□□□ 1.98
SIX4-203ENST00000556952 PFKFB3Q16875 520 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms