RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
SRP54-207ENST00000555535 RPL10P27635 214 aaKnown RBP6.6□□□□□ -1.35
SRP54-207ENST00000555535 ALG1LQ6GMV1 187 aa6.6□□□□□ -1.35
SRP54-207ENST00000555535 TP53I13Q8NBR0 393 aaPredicted RBP6.6□□□□□ -1.35
SRP54-207ENST00000555535 DCTN4Q9UJW0 460 aa6.6□□□□□ -1.35
SRP54-207ENST00000555535 OVOL3O00110 214 aa6.59□□□□□ -1.35
SRP54-207ENST00000555535 SLURP1P55000 103 aa6.59□□□□□ -1.35
SRP54-207ENST00000555535 LAPTM5Q13571 262 aa6.59□□□□□ -1.35
SRP54-207ENST00000555535 TXNDC2Q86VQ3 553 aa6.59□□□□□ -1.35
SRP54-207ENST00000555535 ACSF2Q96CM8 615 aaPredicted RBP6.59□□□□□ -1.35
SRP54-207ENST00000555535 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
SRP54-207ENST00000555535 GRIN3BO60391 1043 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 SORCS2Q96PQ0 1159 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 C12orf49Q9H741 205 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 TTF2Q9UNY4 1162 aaKnown RBP6.58□□□□□ -1.36
SRP54-207ENST00000555535 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
SRP54-207ENST00000555535 BUB1BO60566 1050 aaPredicted RBP6.57□□□□□ -1.36
SRP54-207ENST00000555535 PFKLP17858 780 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 TNNI2P48788 182 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 SEPT6Q14141 434 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 TSNAXIP1Q2TAA8 658 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 SLC16A11Q8NCK7 471 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 FAM13CQ8NE31 585 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 SYTL5Q8TDW5 730 aaPredicted RBP6.57□□□□□ -1.36
SRP54-207ENST00000555535 VWCEQ96DN2 955 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 MIR1-1HGQ9H1L0 117 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 KLHL14Q9P2G3 628 aa6.57□□□□□ -1.36
SRP54-207ENST00000555535 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 C1QTNF3-AMACRE9PGA6 284 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 RBAK-RBAKDNI3L0D1 243 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 FFAR3O14843 346 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 LRRN2O75325 713 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 USP17L7P0C7H9 530 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 PCBP3P57721 371 aaKnown RBP6.56□□□□□ -1.36
SRP54-207ENST00000555535 RTP1P59025 263 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 ADAM17P78536 824 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 RPL6Q02878 288 aaKnown RBP6.56□□□□□ -1.36
SRP54-207ENST00000555535 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
SRP54-207ENST00000555535 SHISA3A0PJX4 238 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 WTIPA6NIX2 430 aaPredicted RBP6.55□□□□□ -1.36
SRP54-207ENST00000555535 MATN3O15232 486 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 EFEMP2O95967 443 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 DAGLBQ8NCG7 672 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 KREMEN1Q96MU8 473 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 SMPD4Q9NXE4 827 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 TNFRSF10DQ9UBN6 386 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
SRP54-207ENST00000555535 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 FSHBP01225 129 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 ENDOUP21128 410 aaKnown RBP6.54□□□□□ -1.36
SRP54-207ENST00000555535 SDHBP21912 280 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 HMGA2P52926 109 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 CHMP4BP1P59074 171 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 ATP2B2Q01814 1243 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 NMIQ13287 307 aaPredicted RBP6.54□□□□□ -1.36
SRP54-207ENST00000555535 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
SRP54-207ENST00000555535 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 TMEM201Q5SNT2 666 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 USHBP1Q8N6Y0 703 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 ZNF655Q8N720 491 aaPredicted RBP6.54□□□□□ -1.36
SRP54-207ENST00000555535 HHIPL1Q96JK4 782 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
SRP54-207ENST00000555535 TARBP2Q15633 366 aaKnown RBP6.53□□□□□ -1.36
SRP54-207ENST00000555535 CCDC85BQ15834 202 aaPredicted RBP6.53□□□□□ -1.36
SRP54-207ENST00000555535 CPZQ66K79 652 aa6.53□□□□□ -1.36
SRP54-207ENST00000555535 LINC00116Q8NCU8 138 aa6.53□□□□□ -1.36
SRP54-207ENST00000555535 TCFL5Q9UL49 500 aa6.53□□□□□ -1.36
SRP54-207ENST00000555535 PCDHB5Q9Y5E4 795 aa6.53□□□□□ -1.36
SRP54-207ENST00000555535 PLCG1P19174 1290 aa6.52□□□□□ -1.37
SRP54-207ENST00000555535 NT5DC1Q5TFE4 455 aa6.52□□□□□ -1.37
SRP54-207ENST00000555535 TTC9BQ8N6N2 239 aa6.52□□□□□ -1.37
SRP54-207ENST00000555535 HDAC8Q9BY41 377 aa6.52□□□□□ -1.37
SRP54-207ENST00000555535 IRS2Q9Y4H2 1338 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 ITGB3P05106 788 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 RLBP1P12271 317 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 IGFBP6P24592 240 aaPredicted RBP6.51□□□□□ -1.37
SRP54-207ENST00000555535 GDF5P43026 501 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 MAPK8P45983 427 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 LIPIQ6XZB0 460 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 FCRL2Q96LA5 508 aaPredicted RBP6.51□□□□□ -1.37
SRP54-207ENST00000555535 CCDC74BQ96LY2 380 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 PLCD4Q9BRC7 762 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 C1QTNF3Q9BXJ4 246 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 FOXP3Q9BZS1 431 aa6.51□□□□□ -1.37
SRP54-207ENST00000555535 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
SRP54-207ENST00000555535 MAPK1P28482 360 aa6.5□□□□□ -1.37
SRP54-207ENST00000555535 RNF4P78317 190 aa6.5□□□□□ -1.37
SRP54-207ENST00000555535 NR1I3Q14994 352 aa6.5□□□□□ -1.37
SRP54-207ENST00000555535 TCTN2Q96GX1 697 aa6.5□□□□□ -1.37
SRP54-207ENST00000555535 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
SRP54-207ENST00000555535 TMEM82A0PJX8 343 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 NUDT19A8MXV4 375 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
SRP54-207ENST00000555535 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms