RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SRSF3P84103 164 aaKnown RBP8.56□□□□□ -1.04
VRK1-205ENST00000555402 AGMOQ6ZNB7 445 aa8.56□□□□□ -1.04
VRK1-205ENST00000555402 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
VRK1-205ENST00000555402 FRMD6Q96NE9 622 aa8.56□□□□□ -1.04
VRK1-205ENST00000555402 NOTOA8MTQ0 251 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 UPK3BL1B0FP48 263 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 UPK3BL2E5RIL1 263 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
VRK1-205ENST00000555402 CCDC85BQ15834 202 aaPredicted RBP8.55□□□□□ -1.04
VRK1-205ENST00000555402 ADGRF1Q5T601 910 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 NLRX1Q86UT6 975 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 RNF141Q8WVD5 230 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 SIRT5Q9NXA8 310 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 ZNF281Q9Y2X9 895 aa8.55□□□□□ -1.04
VRK1-205ENST00000555402 HRKO00198 91 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 EPHB3P54753 998 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 G6PC3Q9BUM1 346 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 MIR1-1HGQ9H1L0 117 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 AK5Q9Y6K8 562 aa8.54□□□□□ -1.04
VRK1-205ENST00000555402 SLC22A31A6NKX4 558 aa8.53□□□□□ -1.04
VRK1-205ENST00000555402 EFEMP2O95967 443 aa8.53□□□□□ -1.04
VRK1-205ENST00000555402 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
VRK1-205ENST00000555402 RPL6Q02878 288 aaKnown RBP8.53□□□□□ -1.04
VRK1-205ENST00000555402 EPB41L4AQ9HCS5 686 aaPredicted RBP8.53□□□□□ -1.04
VRK1-205ENST00000555402 SHISA3A0PJX4 238 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 N4BP3O15049 544 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 ADRB1P08588 477 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 VMACQ2NL98 169 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 C9orf131Q5VYM1 1079 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 ZDHHC14Q8IZN3 488 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.05
VRK1-205ENST00000555402 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
VRK1-205ENST00000555402 LIG3P49916 1009 aa8.51□□□□□ -1.05
VRK1-205ENST00000555402 MAP3K11Q16584 847 aa8.51□□□□□ -1.05
VRK1-205ENST00000555402 BORCS6Q96GS4 357 aa8.51□□□□□ -1.05
VRK1-205ENST00000555402 CNTD2Q9H8S5 307 aa8.51□□□□□ -1.05
VRK1-205ENST00000555402 VIPR1P32241 457 aa8.5□□□□□ -1.05
VRK1-205ENST00000555402 YARSP54577 528 aaKnown RBP8.5□□□□□ -1.05
VRK1-205ENST00000555402 CRTAC1Q9NQ79 661 aa8.5□□□□□ -1.05
VRK1-205ENST00000555402 PLCG1P19174 1290 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 TFE3P19532 575 aaPredicted RBP8.49□□□□□ -1.05
VRK1-205ENST00000555402 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
VRK1-205ENST00000555402 CLEC16AQ2KHT3 1053 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 LDLRAD1Q5T700 205 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
VRK1-205ENST00000555402 RNF34Q969K3 372 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 CRELD1Q96HD1 420 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 KREMEN1Q96MU8 473 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
VRK1-205ENST00000555402 IRS4O14654 1257 aaPredicted RBP8.48□□□□□ -1.05
VRK1-205ENST00000555402 NRDCO43847 1150 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 USP2O75604 605 aaPredicted RBP8.48□□□□□ -1.05
VRK1-205ENST00000555402 RPL10P27635 214 aaKnown RBP8.48□□□□□ -1.05
VRK1-205ENST00000555402 ZNF76P36508 570 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 TMEM201Q5SNT2 666 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 SP8Q8IXZ3 490 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 TMEFF1Q8IYR6 380 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 TMPRSS5Q9H3S3 457 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
VRK1-205ENST00000555402 ZMYM5Q9UJ78 669 aa8.48□□□□□ -1.05
VRK1-205ENST00000555402 TNNI2P48788 182 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 YBX1P67809 324 aaKnown RBP8.47□□□□□ -1.05
VRK1-205ENST00000555402 SLC14A2Q15849 920 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 CNKSR3Q6P9H4 555 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 RNF111Q6ZNA4 994 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
VRK1-205ENST00000555402 IGSF3O75054 1194 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 CTSHP09668 335 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 SDHBP21912 280 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 KIR2DL1P43626 348 aaPredicted RBP8.46□□□□□ -1.06
VRK1-205ENST00000555402 KIR2DL2P43627 348 aaPredicted RBP8.46□□□□□ -1.06
VRK1-205ENST00000555402 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
VRK1-205ENST00000555402 FANCCQ00597 558 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 NT5DC4Q86YG4 428 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 ADAM7Q9H2U9 754 aa8.46□□□□□ -1.06
VRK1-205ENST00000555402 PNLIPP16233 465 aa8.45□□□□□ -1.06
VRK1-205ENST00000555402 CDR1P51861 262 aa8.45□□□□□ -1.06
VRK1-205ENST00000555402 ZXDCQ2QGD7 858 aaPredicted RBP8.45□□□□□ -1.06
VRK1-205ENST00000555402 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
VRK1-205ENST00000555402 FAM129CQ86XR2 697 aa8.45□□□□□ -1.06
VRK1-205ENST00000555402 ENOX1Q8TC92 643 aaKnown RBP8.45□□□□□ -1.06
VRK1-205ENST00000555402 MZB1Q8WU39 189 aa8.45□□□□□ -1.06
VRK1-205ENST00000555402 LUC7LQ9NQ29 371 aaKnown RBP8.45□□□□□ -1.06
VRK1-205ENST00000555402 SPATS1Q496A3 300 aa8.44□□□□□ -1.06
VRK1-205ENST00000555402 CEP128Q6ZU80 1094 aa8.44□□□□□ -1.06
VRK1-205ENST00000555402 MAP6Q96JE9 813 aa8.44□□□□□ -1.06
VRK1-205ENST00000555402 TLR6Q9Y2C9 796 aa8.44□□□□□ -1.06
VRK1-205ENST00000555402 ZC3H12DA2A288 527 aaKnown RBP8.43□□□□□ -1.06
VRK1-205ENST00000555402 ABLIM1O14639 778 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 EFEMP1Q12805 493 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 FRMD5Q7Z6J6 570 aa8.43□□□□□ -1.06
VRK1-205ENST00000555402 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms