RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NDUFB10O96000 172 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 ALDH1A1P00352 501 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 CPA1P15085 419 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 OSBPP22059 807 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 LBX1P52954 281 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 KLRC3Q07444 240 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 IKQ13123 557 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-213ENST00000555386 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
PSEN1-213ENST00000555386 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 ZSCAN10Q96SZ4 725 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-213ENST00000555386 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 ASCC2Q9H1I8 757 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-213ENST00000555386 TNKSO95271 1327 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 BAZ2BQ9UIF8 2168 aaKnown RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 ERICH2A1L162 156 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 CA12O43570 354 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 PRC1O43663 620 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 FLOT1O75955 427 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 HSPA4P34932 840 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 TMEM67Q5HYA8 995 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 ENAHQ8N8S7 591 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 PARK7Q99497 189 aaKnown RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 P2RX7Q99572 595 aaKnown RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 PAGR1Q9BTK6 254 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 GPHNQ9NQX3 736 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-213ENST00000555386 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 SNX14Q9Y5W7 946 aa11.53□□□□□ -0.56
PSEN1-213ENST00000555386 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.56
PSEN1-213ENST00000555386 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.56
PSEN1-213ENST00000555386 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.56
PSEN1-213ENST00000555386 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 IFIT1BQ5T764 474 aaKnown RBP11.52□□□□□ -0.56
PSEN1-213ENST00000555386 RCSD1Q6JBY9 416 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 KCTD1Q719H9 257 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.56
PSEN1-213ENST00000555386 NEK1Q96PY6 1258 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 KAT14Q9H8E8 782 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 SENP2Q9HC62 589 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.56
PSEN1-213ENST00000555386 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-213ENST00000555386 CENPFP49454 3210 aa11.52□□□□□ -0.57
PSEN1-213ENST00000555386 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
PSEN1-213ENST00000555386 COL11A1P12107 1806 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-213ENST00000555386 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 WDR46O15213 610 aaKnown RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 MCM5P33992 734 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 SLC1A4P43007 532 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 ANTXR2P58335 489 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 HERVK_113P62684 666 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 FGD1P98174 961 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 KRT32Q14532 448 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 WTAPQ15007 396 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 NFXL1Q6ZNB6 911 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 LPAR1Q92633 364 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 MKL1Q969V6 931 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 C12orf42Q96LP6 360 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 SAGE1Q9NXZ1 904 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 GPR25O00155 361 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 TLR2O60603 784 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 BMP3P12645 472 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 PLS1Q14651 629 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 ZNF296Q8WUU4 475 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-213ENST00000555386 TTC14Q96N46 770 aa11.51□□□□□ -0.57
PSEN1-213ENST00000555386 PARP14Q460N5 1801 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 GOLGA6L3A6NEY3 463 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 SLC16A2P36021 539 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 SNAP25P60880 206 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 COG2Q14746 738 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 SEC23AQ15436 765 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 TTBK2Q6IQ55 1244 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 BLOC1S2Q6QNY1 142 aa11.5□□□□□ -0.57
PSEN1-213ENST00000555386 DGKHQ86XP1 1220 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms