RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 VCAM1P19320 739 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 HAND2P61296 217 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 IRF5Q13568 498 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 USP17L2Q6R6M4 530 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 TBC1D10CQ8IV04 446 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 MYLIPQ8WY64 445 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 C11orf49Q9H6J7 331 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 MKNK2Q9HBH9 465 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 ANAPC4Q9UJX5 808 aa9.99□□□□□ -0.81
TRIM9-204ENST00000555170 TMEM265A0A087WTH1 108 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 TNPO2O14787 897 aaKnown RBP9.98□□□□□ -0.81
TRIM9-204ENST00000555170 PEX10O60683 326 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 EEF2P13639 858 aaKnown RBP9.98□□□□□ -0.81
TRIM9-204ENST00000555170 MFAP1P55081 439 aaKnown RBP9.98□□□□□ -0.81
TRIM9-204ENST00000555170 BMP2KLQ5H9B9 411 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 FAM47AQ5JRC9 791 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 ASCC2Q9H1I8 757 aaPredicted RBP9.98□□□□□ -0.81
TRIM9-204ENST00000555170 PPP4R2Q9NY27 417 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 NEDD4P46934 1319 aa9.98□□□□□ -0.81
TRIM9-204ENST00000555170 SGSM2O43147 1006 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 FGRP09769 529 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 HOXA7P31268 230 aaPredicted RBP9.97□□□□□ -0.81
TRIM9-204ENST00000555170 USP14P54578 494 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 PTH1RQ03431 593 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 PDE4BQ07343 736 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 CEP95Q96GE4 821 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
TRIM9-204ENST00000555170 ARHGEF10LQ9HCE6 1279 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 TMX2Q9Y320 296 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 PFASO15067 1338 aa9.97□□□□□ -0.81
TRIM9-204ENST00000555170 DOCK3Q8IZD9 2030 aa9.96□□□□□ -0.81
TRIM9-204ENST00000555170 ORC4O43929 436 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 NMT2O60551 498 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 HERVK_113P62684 666 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TFAP4Q01664 338 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 ATP2B2Q01814 1243 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TRIM32Q13049 653 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TJAP1Q5JTD0 557 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 ERICH6BQ5W0A0 696 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 ZNF444Q8N0Y2 327 aaPredicted RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 SPICE1Q8N0Z3 855 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 ANKRD13CQ8N6S4 541 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 NEDD1Q8NHV4 660 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 SMCR8Q8TEV9 937 aaPredicted RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 STAG1Q8WVM7 1258 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 P2RX7Q99572 595 aaKnown RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TTYH1Q9H313 450 aaPredicted RBP9.96□□□□□ -0.82
TRIM9-204ENST00000555170 VCPKMTQ9H867 229 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 KANSL2Q9H9L4 492 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TXNRD2Q9NNW7 524 aa9.96□□□□□ -0.82
TRIM9-204ENST00000555170 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 CNMDO75829 334 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 TSPY3P0CV98 308 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 TSPY8P0CW00 308 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 LRRC26Q2I0M4 334 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
TRIM9-204ENST00000555170 AKNAD1Q5T1N1 836 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 CATSPERGQ6ZRH7 1159 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 RASGRP2Q7LDG7 609 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 NUP88Q99567 741 aaPredicted RBP9.95□□□□□ -0.82
TRIM9-204ENST00000555170 ESYT1Q9BSJ8 1104 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
TRIM9-204ENST00000555170 IL17RBQ9NRM6 502 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 MTMR4Q9NYA4 1195 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 OGDHLQ9ULD0 1010 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
TRIM9-204ENST00000555170 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 ZNF213O14771 459 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 RANBP6O60518 1105 aaKnown RBP9.94□□□□□ -0.82
TRIM9-204ENST00000555170 NDUFB10O96000 172 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 COL6A1P12109 1028 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 FOSL2P15408 326 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 FAM110CQ1W6H9 321 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 COA7Q96BR5 231 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 LSG1Q9H089 658 aaKnown RBP9.94□□□□□ -0.82
TRIM9-204ENST00000555170 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 TOMM22Q9NS69 142 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 RBPJLQ9UBG7 517 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 MORF4L1Q9UBU8 362 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms