RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MOGSQ13724 837 aa20.13■□□□□ 0.81
SHOX-204ENST00000554971 MB21D2Q8IYB1 491 aaPredicted RBP20.13■□□□□ 0.81
SHOX-204ENST00000554971 ESR2Q92731 530 aa20.13■□□□□ 0.81
SHOX-204ENST00000554971 MTMR4Q9NYA4 1195 aa20.13■□□□□ 0.81
SHOX-204ENST00000554971 PFKFB2O60825 505 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 EEF2P13639 858 aaKnown RBP20.12■□□□□ 0.81
SHOX-204ENST00000554971 Q6ZUG5 572 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 KANSL2Q9H9L4 492 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 HTTP42858 3142 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 NOVP48745 357 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 ANTXR2P58335 489 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 HMGN5P82970 282 aaKnown RBP20.12■□□□□ 0.81
SHOX-204ENST00000554971 NOGQ13253 232 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 MTMR2Q13614 643 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 KRT23Q9C075 422 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 ZKSCAN5Q9Y2L8 839 aa20.12■□□□□ 0.81
SHOX-204ENST00000554971 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
SHOX-204ENST00000554971 TERF1P54274 439 aa20.11■□□□□ 0.81
SHOX-204ENST00000554971 BACE1P56817 501 aa20.11■□□□□ 0.81
SHOX-204ENST00000554971 EXOSC10Q01780 885 aaKnown RBP20.11■□□□□ 0.81
SHOX-204ENST00000554971 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
SHOX-204ENST00000554971 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
SHOX-204ENST00000554971 NCOA7Q8NI08 942 aa20.11■□□□□ 0.81
SHOX-204ENST00000554971 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
SHOX-204ENST00000554971 CXCL11O14625 94 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 KIF23Q02241 960 aaPredicted RBP20.1■□□□□ 0.81
SHOX-204ENST00000554971 KIAA1755Q5JYT7 1200 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 BRI3BPQ8WY22 251 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 PTPN18Q99952 460 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 FUCA2Q9BTY2 467 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 TCP11L1Q9NUJ3 509 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 OFD1O75665 1012 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 HMGCS2P54868 508 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.1■□□□□ 0.81
SHOX-204ENST00000554971 RNF214Q8ND24 703 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
SHOX-204ENST00000554971 USP17L10C9JJH3 530 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 TRDNQ13061 729 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 SNAPC2Q13487 334 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 ZNF274Q96GC6 653 aaPredicted RBP20.09■□□□□ 0.81
SHOX-204ENST00000554971 TCEANC2Q96MN5 208 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 EMILIN3Q9NT22 766 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 NYAP2Q9P242 653 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 CFAP45Q9UL16 551 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 STX8Q9UNK0 236 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 TMX2Q9Y320 296 aa20.09■□□□□ 0.81
SHOX-204ENST00000554971 PARP14Q460N5 1801 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 TESPA1A2RU30 521 aaPredicted RBP20.08■□□□□ 0.81
SHOX-204ENST00000554971 TTLL1O95922 423 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 GTF2A2P52657 109 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 FGD1P98174 961 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 ZYXQ15942 572 aaKnown RBP20.08■□□□□ 0.81
SHOX-204ENST00000554971 SH3D19Q5HYK7 790 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 RALYLQ86SE5 291 aaKnown RBP20.08■□□□□ 0.81
SHOX-204ENST00000554971 ENAHQ8N8S7 591 aaPredicted RBP20.08■□□□□ 0.81
SHOX-204ENST00000554971 KIAA1683Q9H0B3 1180 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.81
SHOX-204ENST00000554971 RLFQ13129 1914 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 IGF2BP3O00425 579 aaKnown RBP eCLIP20.08■□□□□ 0.8
SHOX-204ENST00000554971 CCDC192P0DO97 292 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 NT5C2P49902 561 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 EVCP57679 992 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 CCL15Q16663 113 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 RGS22Q8NE09 1264 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 MKL1Q969V6 931 aa20.08■□□□□ 0.8
SHOX-204ENST00000554971 DDX19AQ9NUU7 478 aaKnown RBP20.08■□□□□ 0.8
SHOX-204ENST00000554971 TNKSO95271 1327 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 MAP2K2P36507 400 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 SEC23AQ15436 765 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 LRRC47Q8N1G4 583 aaKnown RBP20.07■□□□□ 0.8
SHOX-204ENST00000554971 BRF1Q92994 677 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
SHOX-204ENST00000554971 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
SHOX-204ENST00000554971 SENP2Q9HC62 589 aa20.07■□□□□ 0.8
SHOX-204ENST00000554971 GPHNQ9NQX3 736 aaPredicted RBP20.07■□□□□ 0.8
SHOX-204ENST00000554971 GOLGA6L4A6NEF3 574 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 GPAT2Q6NUI2 795 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 SPATA32Q96LK8 384 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 ARHGEF10LQ9HCE6 1279 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 MANSC4A6NHS7 340 aaPredicted RBP20.06■□□□□ 0.8
SHOX-204ENST00000554971 TM4SF4P48230 202 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 FEZ1Q99689 392 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 TMEM47Q9BQJ4 181 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 LRRC2Q9BYS8 371 aa20.06■□□□□ 0.8
SHOX-204ENST00000554971 C19orf81C9J6K1 198 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 H3BQV1 296 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 CETPP11597 493 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 STK3Q13188 491 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 IFFO2Q5TF58 517 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 SPICE1Q8N0Z3 855 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms