RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TRAF5O00463 557 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 JAK2O60674 1132 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 DEXIO95424 95 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 NDUFB10O96000 172 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 ECE1P42892 770 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 NUCB2P80303 420 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 C2orf69Q8N8R5 385 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
SHOX2-206ENST00000554685 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 SLC26A6Q9BXS9 759 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 CHMP5Q9NZZ3 219 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
SHOX2-206ENST00000554685 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
SHOX2-206ENST00000554685 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
SHOX2-206ENST00000554685 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 BMP3P12645 472 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 PPATQ06203 517 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 GBA2Q9HCG7 927 aaPredicted RBP16.66■□□□□ 0.26
SHOX2-206ENST00000554685 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
SHOX2-206ENST00000554685 WDR46O15213 610 aaKnown RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 CELF2O95319 508 aaKnown RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 XBP1P17861 261 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 DDIT3P35638 169 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 BACE1P56817 501 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 FUT2Q10981 343 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 SPP2Q13103 211 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 LDLRAD1Q5T700 205 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 PHKBQ93100 1093 aa16.65■□□□□ 0.26
SHOX2-206ENST00000554685 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 FRMPD2Q68DX3 1309 aaPredicted RBP16.65■□□□□ 0.26
SHOX2-206ENST00000554685 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 PLA2G6O60733 806 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 ITGBL1O95965 494 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-206ENST00000554685 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 TRIM29Q14134 588 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-206ENST00000554685 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 CHURC1Q8WUH1 139 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
SHOX2-206ENST00000554685 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
SHOX2-206ENST00000554685 AFG3L2Q9Y4W6 797 aa16.64■□□□□ 0.25
SHOX2-206ENST00000554685 UBE2Q2LH0YL09 131 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 KIF3CO14782 793 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 FDPSP14324 419 aaKnown RBP16.63■□□□□ 0.25
SHOX2-206ENST00000554685 IKQ13123 557 aaPredicted RBP16.63■□□□□ 0.25
SHOX2-206ENST00000554685 PPIL2Q13356 520 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 MTMR2Q13614 643 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
SHOX2-206ENST00000554685 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
SHOX2-206ENST00000554685 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
SHOX2-206ENST00000554685 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
SHOX2-206ENST00000554685 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 H3BQV1 296 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 CXCL11O14625 94 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 STX6O43752 255 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 SYT1P21579 422 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 STAT2P52630 851 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 SH3D19Q5HYK7 790 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 BTNL9Q6UXG8 535 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 MOB2Q70IA6 237 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
SHOX2-206ENST00000554685 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
SHOX2-206ENST00000554685 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-206ENST00000554685 OTOFQ9HC10 1997 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 SCG2P13521 617 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 YY1P25490 414 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 TRAF1Q13077 416 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
SHOX2-206ENST00000554685 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
SHOX2-206ENST00000554685 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
SHOX2-206ENST00000554685 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms