RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 TRIM10Q9UDY6 481 aa12.54□□□□□ -0.4
NUMB-212ENST00000554546 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
NUMB-212ENST00000554546 VIMP08670 466 aaKnown RBP12.54□□□□□ -0.4
NUMB-212ENST00000554546 SP100P23497 879 aaPredicted RBP12.54□□□□□ -0.4
NUMB-212ENST00000554546 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
NUMB-212ENST00000554546 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
NUMB-212ENST00000554546 PI16Q6UXB8 463 aa12.54□□□□□ -0.4
NUMB-212ENST00000554546 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
NUMB-212ENST00000554546 LMTK2Q8IWU2 1503 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 A8MUI8 341 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 TRIM37O94972 964 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 KCNA4P22459 653 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.41e-7■■■■□ 20.4
NUMB-212ENST00000554546 MECOMQ03112 1051 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 RBL2Q08999 1139 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 NANOGNBQ7Z5D8 188 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 P3H4Q92791 437 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 ERVK-7P63135 1459 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 ZNF233A6NK53 670 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 LSM1O15116 133 aaKnown RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 ZNF185O15231 689 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 TMOD1P28289 359 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 KCNJ2P63252 427 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 MOV10L1Q9BXT6 1211 aaKnown RBP12.53□□□□□ -0.4
NUMB-212ENST00000554546 STK38LQ9Y2H1 464 aa12.53□□□□□ -0.4
NUMB-212ENST00000554546 TMCC1O94876 653 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 P3H1Q32P28 736 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 CNTROBQ8N137 903 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 IWS1Q96ST2 819 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 TMCO1Q9UM00 188 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 CEP152O94986 1710 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 NEDD4P46934 1319 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 CCT8L1PA6NM43 557 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 HNRNPCP07910 306 aaKnown RBP eCLIP12.52□□□□□ -0.44e-6■□□□□ 10.4
NUMB-212ENST00000554546 ALDH5A1P51649 535 aaPredicted RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 STK38Q15208 465 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 ANKRD1Q15327 319 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 OGFOD1Q8N543 542 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 GBP7Q8N8V2 638 aaPredicted RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 TRIM11Q96F44 468 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 NLRP3Q96P20 1036 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 PPP1R12CQ9BZL4 782 aa12.52□□□□□ -0.4
NUMB-212ENST00000554546 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.4
NUMB-212ENST00000554546 FLOT1O75955 427 aa12.52□□□□□ -0.41
NUMB-212ENST00000554546 PSMC4P43686 418 aa12.52□□□□□ -0.41
NUMB-212ENST00000554546 EPHB4P54760 987 aa12.52□□□□□ -0.41
NUMB-212ENST00000554546 SPTY2D1Q68D10 685 aaPredicted RBP12.52□□□□□ -0.41
NUMB-212ENST00000554546 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
NUMB-212ENST00000554546 APLFQ8IW19 511 aaPredicted RBP12.52□□□□□ -0.41
NUMB-212ENST00000554546 LRRC1Q9BTT6 524 aa12.52□□□□□ -0.41
NUMB-212ENST00000554546 PDE2AO00408 941 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 KRT38O76015 456 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 PSMA5P28066 241 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 NCCRP1Q6ZVX7 275 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 RPGRIP1Q96KN7 1286 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 HNRNPRO43390 633 aaKnown RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 GSTT1P30711 240 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 KLC1Q07866 573 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 TSNAXIP1Q2TAA8 658 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 NRXN1Q9ULB1 1477 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 PENKP01210 267 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 TOB2Q14106 344 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 GLE1Q53GS7 698 aaKnown RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 SNRNP27Q8WVK2 155 aaKnown RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
NUMB-212ENST00000554546 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
NUMB-212ENST00000554546 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 CLCN2P51788 898 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 IQCF2Q8IXL9 164 aa12.5□□□□□ -0.41
NUMB-212ENST00000554546 LINS1Q8NG48 757 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms