RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 MYADML2A6NDP7 307 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 SEPT4O43236 478 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 MBD4O95243 580 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 ACRP10323 421 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 EEF2P13639 858 aaKnown RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 FOSL2P15408 326 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 PBX2P40425 430 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 CEP85Q6P2H3 762 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 MMP19Q99542 508 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 CRNKL1Q9BZJ0 848 aaKnown RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 EHD4Q9H223 541 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 BOLA2Q9H3K6 86 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 DCP1AQ9NPI6 582 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-208ENST00000554534 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 MYO9BQ13459 2157 aa8.12□□□□□ -1.11
PCNX4-208ENST00000554534 TCRBV5S4A2TA0A5A2 114 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 USP17L21D6R901 530 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
PCNX4-208ENST00000554534 FCER1AP12319 257 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 RAG1P15918 1043 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 CDK8P49336 464 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 FAM83BQ5T0W9 1011 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 RHPN1Q8TCX5 695 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 PPP1R13LQ8WUF5 828 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 RNPC3Q96LT9 517 aaKnown RBP8.11□□□□□ -1.11
PCNX4-208ENST00000554534 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 RIPK3Q9Y572 518 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 MCM3APO60318 1980 aa8.11□□□□□ -1.11
PCNX4-208ENST00000554534 PARP14Q460N5 1801 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 REV3LO60673 3130 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 CHD9Q3L8U1 2897 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 TCF20Q9UGU0 1960 aaKnown RBP8.1□□□□□ -1.11
PCNX4-208ENST00000554534 A0A1W2PQ45 241 aaPredicted RBP8.1□□□□□ -1.11
PCNX4-208ENST00000554534 A0A1W2PQY0 241 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 ADCY6O43306 1168 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 STRNO43815 780 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 MSCO60682 206 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 CLTBP09497 229 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 ZNF865P0CJ78 1059 aaPredicted RBP8.1□□□□□ -1.11
PCNX4-208ENST00000554534 ICA1Q05084 483 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 FAAP100Q0VG06 881 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 TMEM63BQ5T3F8 832 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 C16orf59Q7L2K0 433 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 CPXCR1Q8N123 301 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 TINF2Q9BSI4 451 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 VCPKMTQ9H867 229 aa8.1□□□□□ -1.11
PCNX4-208ENST00000554534 SNAI1O95863 264 aaPredicted RBP8.09□□□□□ -1.11
PCNX4-208ENST00000554534 RARBP10826 455 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 STAT3P40763 770 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 SNAP25P60880 206 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 HNRNPUQ00839 825 aaKnown RBP eCLIP8.09□□□□□ -1.11
PCNX4-208ENST00000554534 BEX3Q00994 111 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 SNX17Q15036 470 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 KCNA10Q16322 511 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 ZNF792Q3KQV3 632 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 CCDC129Q6ZRS4 1044 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 TMEM179Q6ZVK1 233 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.09□□□□□ -1.11
PCNX4-208ENST00000554534 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.09□□□□□ -1.11
PCNX4-208ENST00000554534 PRDM12Q9H4Q4 367 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 MROH8Q9H579 483 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 ZHX1Q9UKY1 873 aaPredicted RBP8.09□□□□□ -1.11
PCNX4-208ENST00000554534 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 TMX2Q9Y320 296 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 SLC4A4Q9Y6R1 1079 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 TTC28Q96AY4 2481 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 A0A0G2JMZ2 1700 aa8.09□□□□□ -1.11
PCNX4-208ENST00000554534 MINDY4BA8MYZ0 360 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 VWA5AO00534 786 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 PRDM1O75626 825 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
PCNX4-208ENST00000554534 CSF2RAP15509 400 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 DNAJB2P25686 324 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 CYP2C18P33260 490 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 ACLYP53396 1101 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 SMAD3P84022 425 aaKnown RBP8.08□□□□□ -1.12
PCNX4-208ENST00000554534 FPGSQ05932 587 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 KCTD2Q14681 263 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 C12orf60Q5U649 245 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 TSHZ3Q63HK5 1081 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 SNRNP48Q6IEG0 339 aaKnown RBP8.08□□□□□ -1.12
PCNX4-208ENST00000554534 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 SHCBP1Q8NEM2 672 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 REPS2Q8NFH8 660 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 PUS7LQ9H0K6 701 aaKnown RBP8.08□□□□□ -1.12
PCNX4-208ENST00000554534 RAVER2Q9HCJ3 691 aaKnown RBP8.08□□□□□ -1.12
PCNX4-208ENST00000554534 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 PAG1Q9NWQ8 432 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
PCNX4-208ENST00000554534 TACC3Q9Y6A5 838 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms