RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 AUHQ13825 339 aaKnown RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 AXDND1Q5T1B0 1012 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 VHLLQ6RSH7 139 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 ZNF574Q6ZN55 896 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 SPRED2Q7Z698 418 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 HNRNPLLQ8WVV9 542 aaKnown RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 SREK1Q8WXA9 508 aaKnown RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
SCFD1-211ENST00000554437 GPR62Q9BZJ7 368 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 PRDM14Q9GZV8 571 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 ATP13A1Q9HD20 1204 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 PCDHB12Q9Y5F1 795 aa7.93□□□□□ -1.14
SCFD1-211ENST00000554437 SHISA3A0PJX4 238 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 WASH4PA8MWX3 477 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 ADAMTS4O75173 837 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 CD8BP10966 210 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 SRFP11831 508 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 TPP2P29144 1249 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-211ENST00000554437 NMIQ13287 307 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-211ENST00000554437 IKZF1Q13422 519 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 LCE1DQ5T752 114 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 DCAF15Q66K64 600 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 TMC3Q7Z5M5 1100 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 C7orf61Q8IZ16 206 aa7.92□□□□□ -1.14
SCFD1-211ENST00000554437 FXNQ16595 210 aa7.91□□□□□ -1.14
SCFD1-211ENST00000554437 KIAA1211LQ6NV74 962 aa7.91□□□□□ -1.14
SCFD1-211ENST00000554437 TSPYL5Q86VY4 417 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-211ENST00000554437 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
SCFD1-211ENST00000554437 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
SCFD1-211ENST00000554437 TCEAL1Q15170 157 aa7.9□□□□□ -1.14
SCFD1-211ENST00000554437 ANKRD39Q53RE8 183 aa7.9□□□□□ -1.14
SCFD1-211ENST00000554437 ANGEL2Q5VTE6 544 aaKnown RBP7.9□□□□□ -1.14
SCFD1-211ENST00000554437 ENOX1Q8TC92 643 aaKnown RBP7.9□□□□□ -1.14
SCFD1-211ENST00000554437 KLHL6Q8WZ60 621 aa7.9□□□□□ -1.14
SCFD1-211ENST00000554437 PAK6Q9NQU5 681 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-211ENST00000554437 GFOD1Q9NXC2 390 aa7.9□□□□□ -1.14
SCFD1-211ENST00000554437 KLF4O43474 513 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 DDAH1O94760 285 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 NCAPHQ15003 741 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
SCFD1-211ENST00000554437 HEATR6Q6AI08 1181 aaKnown RBP7.89□□□□□ -1.15
SCFD1-211ENST00000554437 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-211ENST00000554437 NFXL1Q6ZNB6 911 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 TMPRSS7Q7RTY8 843 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 HAUS7Q99871 368 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 TRIM55Q9BYV6 548 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 DUSP13Q9UII6 198 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 ZNF451Q9Y4E5 1061 aa7.89□□□□□ -1.15
SCFD1-211ENST00000554437 MEIS1O00470 390 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 SHOXO15266 292 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 SIGLEC6O43699 453 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 PRAMEF1O95521 474 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 CD247P20963 164 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 LTKP29376 864 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 ZP2Q05996 745 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 WFDC3Q8IUB2 231 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 DAGLBQ8NCG7 672 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-211ENST00000554437 DRC1Q96MC2 740 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-211ENST00000554437 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 GP6Q9HCN6 339 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 ST7Q9NRC1 585 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 MINPP1Q9UNW1 487 aa7.88□□□□□ -1.15
SCFD1-211ENST00000554437 B2RBV5 119 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 CBFA2T2O43439 604 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 EPHX1P07099 455 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 ITGA4P13612 1032 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 PLCL1Q15111 1095 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 GAB4Q2WGN9 574 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 ADAT2Q7Z6V5 191 aaKnown RBP7.87□□□□□ -1.15
SCFD1-211ENST00000554437 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-211ENST00000554437 CELF2-AS1Q8N7Q2 184 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 AGBL5Q8NDL9 886 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 MICAL1Q8TDZ2 1067 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 BRF1Q92994 677 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 DSCC1Q9BVC3 393 aa7.87□□□□□ -1.15
SCFD1-211ENST00000554437 CARS2Q9HA77 564 aaKnown RBP7.87□□□□□ -1.15
SCFD1-211ENST00000554437 U2SURPO15042 1029 aaKnown RBP7.86□□□□□ -1.15
SCFD1-211ENST00000554437 ESR1P03372 595 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 GP2P55259 537 aaKnown RBP7.86□□□□□ -1.15
SCFD1-211ENST00000554437 ZNF445P59923 1031 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 RAB33AQ14088 237 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 TCTN2Q96GX1 697 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 FGD4Q96M96 766 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 KLHL25Q9H0H3 589 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 GBP3Q9H0R5 595 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 PRR13Q9NZ81 148 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 LMCD1Q9NZU5 365 aa7.86□□□□□ -1.15
SCFD1-211ENST00000554437 SSU72P8A0A1W2PR75 194 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 ANKRD34BA5PLL1 514 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 GJB6O95452 261 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 FUT4P22083 530 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 EGR3Q06889 387 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 RBL2Q08999 1139 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 DDR2Q16832 855 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms