RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PDE8AO60658 829 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZBTB48P10074 688 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 RBP3P10745 1247 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 GPTP24298 496 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ATICP31939 592 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 MECOMQ03112 1051 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 SREBF2Q12772 1141 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 MFSD10Q14728 455 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 DNAJC21Q5F1R6 531 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 STRIP1Q5VSL9 837 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 TAF3Q5VWG9 929 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ALKBH2Q6NS38 261 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZCCHC8Q6NZY4 707 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZIC5Q96T25 663 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 C22orf23Q9BZE7 217 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 COA1Q9GZY4 146 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PTPRHQ9HD43 1115 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 TRMT112Q9UI30 125 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 LEMD3Q9Y2U8 911 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF804BA4D1E1 1349 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RPAP1Q9BWH6 1393 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 USP17L3A6NCW0 530 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 USP17L4A6NCW7 530 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 HMMRO75330 724 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RNASEH2AO75792 299 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RAD17O75943 681 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 VAMP1P23763 118 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 CCDC152Q4G0S7 254 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 DACT2Q5SW24 774 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 C16orf87Q6PH81 154 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 USP17L1Q7RTZ2 530 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 FBXO33Q7Z6M2 555 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 APOBEC3FQ8IUX4 373 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 OGFOD1Q8N543 542 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 STK32AQ8WU08 396 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 CELF1Q92879 486 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RUNDC1Q96C34 613 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 PAIP2Q9BPZ3 127 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 METTL22Q9BUU2 404 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RMI1Q9H9A7 625 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MYOZ2Q9NPC6 264 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 AVENQ9NQS1 362 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MIS18AQ9NYP9 233 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ANAPC4Q9UJX5 808 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 GGA1Q9UJY5 639 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RRP7AQ9Y3A4 280 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 PHIPQ8WWQ0 1821 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 IL16Q14005 1332 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MYBBP1AQ9BQG0 1328 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MYH13Q9UKX3 1938 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SHTN1A0MZ66 631 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MANSC4A6NHS7 340 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ADM5C9JUS6 153 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 IPO5O00410 1097 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 IRS4O14654 1257 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ECEL1O95672 775 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 BPNT1O95861 308 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 PROCP04070 461 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 HCLS1P14317 486 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MYL6BP14649 208 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF157P51786 506 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RIPK4P57078 832 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 MAP2K5Q13163 448 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SCARF1Q14162 830 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ZC3H12AQ5D1E8 599 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SWT1Q5T5J6 900 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF385CQ66K41 422 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 RELL1Q8IUW5 271 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SULF1Q8IWU6 871 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SVIPQ8NHG7 77 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 CASS4Q9NQ75 786 aa3.2□□□□□ -1.9
PRPF39-206ENST00000554429 GEMIN8Q9NWZ8 242 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 CGNQ9P2M7 1197 aaKnown RBP3.2□□□□□ -1.9
PRPF39-206ENST00000554429 SOWAHDA6NJG2 315 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 TRIM64CA6NLI5 447 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 H7C1W4 665 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 GPR25O00155 361 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 SLC26A4O43511 780 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 TLL1O43897 1013 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 DNAJC6O75061 913 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 FKTNO75072 461 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 EGFRP00533 1210 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 GNRH1P01148 92 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CSF1RP07333 972 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 USP17L8P0C7I0 530 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CASP7P55210 303 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 PSMC1P62191 440 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 POU5F1BQ06416 359 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 BRD3Q15059 726 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CHPFQ8IZ52 775 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CLASRPQ8N2M8 674 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 KIAA1958Q8N8K9 716 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CCDC89Q8N998 374 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 PRPF38AQ8NAV1 312 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 HELQQ8TDG4 1101 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ITFG2Q969R8 447 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 MRIQ9BWK5 157 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 RANBP17Q9H2T7 1088 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 GGA3Q9NZ52 723 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms