RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 R3HDM1Q15032 1099 aaKnown RBP4.77□□□□□ -1.65
SLIRP-202ENST00000553981 ARHGAP27Q6ZUM4 889 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 PTF1AQ7RTS3 328 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 KRT27Q7Z3Y8 459 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 SULF2Q8IWU5 870 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 TOP6BLQ8N6T0 577 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 CAMKK2Q96RR4 588 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 C14orf93Q9H972 538 aaKnown RBP4.77□□□□□ -1.65
SLIRP-202ENST00000553981 ADGRB1O14514 1584 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 KIF1AQ12756 1690 aa4.77□□□□□ -1.65
SLIRP-202ENST00000553981 TMEM265A0A087WTH1 108 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 FARP2O94887 1054 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 ITIH2P19823 946 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 ERVK-24P63145 666 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 ZC3H12AQ5D1E8 599 aaKnown RBP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 RNF214Q8ND24 703 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 GPBAR1Q8TDU6 330 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 TMEM40Q8WWA1 233 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 HEXIM2Q96MH2 286 aaKnown RBP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 RBCK1Q9BYM8 510 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 BCO2Q9BYV7 579 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 PDGFDQ9GZP0 370 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 TNKS2Q9H2K2 1166 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 SSU72Q9NP77 194 aaKnown RBP4.76□□□□□ -1.65
SLIRP-202ENST00000553981 CAMTA1Q9Y6Y1 1673 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 SBNO1A3KN83 1393 aa4.76□□□□□ -1.65
SLIRP-202ENST00000553981 SPATA31A5Q5VU36 1347 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 SPATA31A7Q8IWB4 1347 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 NUP188Q5SRE5 1749 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 CCDC144AA2RUR9 1427 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 DISP2A7MBM2 1401 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 DBX1A6NMT0 343 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 XRCC5P13010 732 aaKnown RBP4.75□□□□□ -1.65
SLIRP-202ENST00000553981 ARNTP27540 789 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 ZNF252P-AS1Q0IIN9 211 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 CHRNA2Q15822 529 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 ANGEL2Q5VTE6 544 aaKnown RBP4.75□□□□□ -1.65
SLIRP-202ENST00000553981 MAP1SQ66K74 1059 aaPredicted RBP4.75□□□□□ -1.65
SLIRP-202ENST00000553981 FAM214BQ7L5A3 538 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 PRAM1Q96QH2 718 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 MPHOSPH9Q99550 1183 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 HIRIP3Q9BW71 556 aaPredicted RBP4.75□□□□□ -1.65
SLIRP-202ENST00000553981 PRDM7Q9NQW5 492 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 NLRP2Q9NX02 1062 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 PPP4R2Q9NY27 417 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 BTG4Q9NY30 223 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 RREB1Q92766 1687 aa4.75□□□□□ -1.65
SLIRP-202ENST00000553981 COL14A1Q05707 1796 aaKnown RBP4.74□□□□□ -1.65
SLIRP-202ENST00000553981 NME2P22392 152 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 SLC23A3Q6PIS1 610 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 NXPE4Q6UWF7 544 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 MPRIPQ6WCQ1 1025 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 CACNA2D2Q9NY47 1150 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 AKAP2Q9Y2D5 859 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 SNX11Q9Y5W9 270 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 PHRF1Q9P1Y6 1649 aaKnown RBP4.74□□□□□ -1.65
SLIRP-202ENST00000553981 RGPD1P0DJD0 1748 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 ADGRB2O60241 1585 aa4.74□□□□□ -1.65
SLIRP-202ENST00000553981 DLC1Q96QB1 1528 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 TRIM37O94972 964 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 NTF4P34130 210 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 MESP2Q0VG99 397 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 PPM1JQ5JR12 505 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 SPOCD1Q6ZMY3 1216 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 TMC7Q7Z402 723 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 UBE3DQ7Z6J8 389 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 KSR1Q8IVT5 923 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 FLAD1Q8NFF5 587 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 ASB11Q8WXH4 323 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 ACSBG1Q96GR2 724 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 EMILIN2Q9BXX0 1053 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 CCDC9Q9Y3X0 531 aaKnown RBP4.73□□□□□ -1.65
SLIRP-202ENST00000553981 CSADQ9Y600 493 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 KIAA0232Q92628 1395 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 LMO7Q8WWI1 1683 aa4.73□□□□□ -1.65
SLIRP-202ENST00000553981 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 PEAK1Q9H792 1746 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 IGF2BP3O00425 579 aaKnown RBP eCLIP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 PKN1Q16512 942 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 ZSWIM9Q86XI8 627 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 SPACA3Q8IXA5 215 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 C3orf58Q8NDZ4 430 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 GRIN3AQ8TCU5 1115 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 CBX8Q9HC52 389 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 PRDM10Q9NQV6 1147 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 GTF2IRD1Q9UHL9 959 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 DHX57Q6P158 1386 aaKnown RBP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 ANKRD30BQ9BXX2 1392 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 ATP7BP35670 1465 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 CASZ1Q86V15 1759 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 ARHGEF28Q8N1W1 1705 aaKnown RBP4.72□□□□□ -1.65
SLIRP-202ENST00000553981 TULP4Q9NRJ4 1543 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 ANKARQ7Z5J8 1434 aa4.72□□□□□ -1.65
SLIRP-202ENST00000553981 NRKQ7Z2Y5 1582 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms