RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
ACTN1-211ENST00000553882 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
ACTN1-211ENST00000553882 GOLGA6L9A6NEM1 432 aa16.5■□□□□ 0.23
ACTN1-211ENST00000553882 PDXDC2PQ6P474 469 aa16.5■□□□□ 0.23
ACTN1-211ENST00000553882 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-211ENST00000553882 IL17RBQ9NRM6 502 aa16.5■□□□□ 0.23
ACTN1-211ENST00000553882 GNPATO15228 680 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 CCDC175P0C221 793 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 PNMA1Q8ND90 353 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 KIFC2Q96AC6 838 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
ACTN1-211ENST00000553882 VPS16Q9H269 839 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 EFCAB8A8MWE9 144 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 KIF5BP33176 963 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 USP5P45974 858 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
ACTN1-211ENST00000553882 DIXDC1Q155Q3 683 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 AMIGO3Q86WK7 504 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 SLC44A5Q8NCS7 719 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 PANX2Q96RD6 677 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 EP400Q96L91 3159 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 ZPR1O75312 459 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 GYPCP04921 128 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 PBX1P40424 430 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 KRT31Q15323 416 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-211ENST00000553882 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 PLIN2Q99541 437 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 GDAQ9Y2T3 454 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 FHOD1Q9Y613 1164 aa16.49■□□□□ 0.23
ACTN1-211ENST00000553882 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-211ENST00000553882 NRAPQ86VF7 1730 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 N4BP3O15049 544 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 MFAP3LO75121 409 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 SEC31AO94979 1220 aaKnown RBP16.48■□□□□ 0.23
ACTN1-211ENST00000553882 MAP3K9P80192 1104 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 PPP2R3AQ06190 1150 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 GPR101Q96P66 508 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-211ENST00000553882 NYXQ9GZU5 481 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 ANKRD2Q9GZV1 360 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 ANKIB1Q9P2G1 1089 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 MRFAP1Q9Y605 127 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-211ENST00000553882 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-211ENST00000553882 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 ADGRG1Q9Y653 693 aa16.48■□□□□ 0.23
ACTN1-211ENST00000553882 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 GRIK5Q16478 980 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 CT47A1Q5JQC4 288 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-211ENST00000553882 FAM53CQ9NYF3 392 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-211ENST00000553882 STAT6P42226 847 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 PAK1Q13153 545 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
ACTN1-211ENST00000553882 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 CPVLQ9H3G5 476 aa16.47■□□□□ 0.23
ACTN1-211ENST00000553882 ARGLU1Q9NWB6 273 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-211ENST00000553882 RNF225M0QZC1 329 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-211ENST00000553882 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-211ENST00000553882 RPN1P04843 607 aaKnown RBP16.46■□□□□ 0.23
ACTN1-211ENST00000553882 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
ACTN1-211ENST00000553882 GABPB1Q06547 395 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-211ENST00000553882 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
ACTN1-211ENST00000553882 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
ACTN1-211ENST00000553882 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 TRIM49BA6NDI0 452 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.22
ACTN1-211ENST00000553882 CALML3P27482 149 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 INF2Q27J81 1249 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 ACRBPQ8NEB7 543 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 TGFBRAP1Q8WUH2 860 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 TMEM60Q9H2L4 133 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 PCDHA4Q9UN74 947 aa16.46■□□□□ 0.22
ACTN1-211ENST00000553882 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 ABL1P00519 1130 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 TXLNAP40222 546 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms