RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 FAM43AQ8N2R8 423 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 EYA3Q99504 573 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MDFIQ99750 246 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TTYH1Q9H313 450 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ZFP64Q9NPA5 681 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 AVENQ9NQS1 362 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 LAMB2P55268 1798 aa7.21□□□□□ -1.25
SMARCE1P3-201ENST00000553649 A0A1W2PNR3 127 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MRE11P49959 708 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PHTF2Q8N3S3 785 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TBC1D16Q8TBP0 767 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PNNQ9H307 717 aaKnown RBP7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CHPF2Q9P2E5 772 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 COL4A1P02462 1669 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TAF1P21675 1872 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DLG5Q8TDM6 1919 aa7.21□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PSME4Q14997 1843 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TLR2O60603 784 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 UFL1O94874 794 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 SASH1O94885 1247 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TFRCP02786 760 aaKnown RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MMP14P50281 582 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 UBXN2AP68543 259 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 KIF22Q14807 665 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PRSS36Q5K4E3 855 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 HDGFL1Q5TGJ6 251 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZNF468Q5VIY5 522 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 NECAB2Q7Z6G3 386 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 BANK1Q8NDB2 785 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 RAET1EQ8TD07 263 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZBED3Q96IU2 234 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DEFB118Q96PH6 123 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 FAM205AQ6ZU69 1335 aa7.2□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 IRS4O14654 1257 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CAPN2P17655 700 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 RPS8P62241 208 aaKnown RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 APOBEC3FQ8IUX4 373 aaKnown RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MTMR14Q8NCE2 650 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 C1orf216Q8TAB5 229 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ATXN2LQ8WWM7 1075 aaKnown RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 JARID2Q92833 1246 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ASB2Q96Q27 587 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PAK6Q9NQU5 681 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 SEC31BQ9NQW1 1179 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 BIN2Q9UBW5 565 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CCL15-CCL14A0A0B4J2E2 113 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TMPOP42166 694 aaKnown RBP7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PSMC4P43686 418 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PRKCZQ05513 592 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CCL15Q16663 113 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 C17orf99Q6UX52 265 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PLBD2Q8NHP8 589 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 OPTNQ96CV9 577 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 NECAB3Q96P71 396 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MYPNQ86TC9 1320 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ADGRA2Q96PE1 1338 aa7.18□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MUC6Q6W4X9 2439 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP2O75604 605 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DACT2Q5SW24 774 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ISCA1Q9BUE6 129 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DEFB129Q9H1M3 183 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 EPHX3Q9H6B9 360 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELP3Q9H9T3 547 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZCCHC17Q9NP64 241 aaKnown RBP7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 C11orf16Q9NQ32 467 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 BABAM1Q9NWV8 329 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PPP2R3BQ9Y5P8 575 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CHL1O00533 1208 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 EFSO43281 561 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 INHAP05111 366 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 FAM157BP0CG42 384 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 HOXD10P28358 340 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP4Q13107 963 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CCDC152Q4G0S7 254 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ARSJQ5FYB0 599 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ANKRD13AQ8IZ07 590 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms