RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
ATXN3-222ENST00000553570 EVC2Q86UK5 1308 aa6.48□□□□□ -1.37
ATXN3-222ENST00000553570 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 GPRASP1Q5JY77 1395 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 JCADQ9P266 1359 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 SHPRHQ149N8 1683 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 CELA3AP09093 270 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 MAP7Q14244 749 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 MAP1SQ66K74 1059 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
ATXN3-222ENST00000553570 MED1Q15648 1581 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-222ENST00000553570 FAM170BA6NMN3 283 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 NEFMP07197 916 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 RING1Q06587 406 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 CPSF6Q16630 551 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-222ENST00000553570 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 TTF2Q9UNY4 1162 aaKnown RBP6.46□□□□□ -1.38
ATXN3-222ENST00000553570 AHDC1Q5TGY3 1603 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-222ENST00000553570 ACEP12821 1306 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 PRR36Q9H6K5 1346 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.38
ATXN3-222ENST00000553570 RGPD5Q99666 1765 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 TRIM37O94972 964 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 FOSL1P15407 271 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 NTF4P34130 210 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 ERVK-24P63145 666 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 ZNF394Q53GI3 561 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 GGT7Q9UJ14 662 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
ATXN3-222ENST00000553570 AKAP12Q02952 1782 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 GRIK1P39086 918 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 PCNX4Q63HM2 1172 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 HS2ST1Q7LGA3 356 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 ERMP1Q7Z2K6 904 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 TGIF2Q9GZN2 237 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 DDX41Q9UJV9 622 aaKnown RBP6.44□□□□□ -1.38
ATXN3-222ENST00000553570 CYP8B1Q9UNU6 501 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 TULP4Q9NRJ4 1543 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
ATXN3-222ENST00000553570 RALGAPBQ86X10 1494 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-222ENST00000553570 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
ATXN3-222ENST00000553570 RACK1P63244 317 aaKnown RBP6.43□□□□□ -1.38
ATXN3-222ENST00000553570 TMF1P82094 1093 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 LLGL2Q6P1M3 1020 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-222ENST00000553570 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 SAMM50Q9Y512 469 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 AFF2P51816 1311 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 SPATA31A3Q5VYP0 1347 aa6.43□□□□□ -1.38
ATXN3-222ENST00000553570 ANKARQ7Z5J8 1434 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 EVA1CP58658 441 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 LRRC14Q15048 493 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 ZNF772Q68DY9 489 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-222ENST00000553570 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-222ENST00000553570 USP48Q86UV5 1035 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 GAL3ST3Q96A11 431 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 ISL2Q96A47 359 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 ACBD3Q9H3P7 528 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 PCOLCE2Q9UKZ9 415 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-222ENST00000553570 TOPAZ1Q8N9V7 1692 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 PNPLA6Q8IY17 1366 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 USP47Q96K76 1375 aa6.42□□□□□ -1.38
ATXN3-222ENST00000553570 TRPM3Q9HCF6 1732 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-222ENST00000553570 PXDNQ92626 1479 aa6.41□□□□□ -1.38
ATXN3-222ENST00000553570 MAP2P11137 1827 aaKnown RBP6.41□□□□□ -1.38
ATXN3-222ENST00000553570 F6X3S4 739 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms