RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 HAND2P61296 217 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 IMMTQ16891 758 aaKnown RBP18.13■□□□□ 0.49
SHMT2-204ENST00000553324 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
SHMT2-204ENST00000553324 SHCBP1Q8NEM2 672 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 INCENPQ9NQS7 918 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 PPP1R9AQ9ULJ8 1098 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 SLC15A5A6NIM6 579 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 SLC25A27O95847 323 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
SHMT2-204ENST00000553324 MORN1Q5T089 497 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 ESR2Q92731 530 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 ATG4CQ96DT6 458 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 TTC14Q96N46 770 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 MROH8Q9H579 483 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 IL17RBQ9NRM6 502 aa18.12■□□□□ 0.49
SHMT2-204ENST00000553324 MYH8P13535 1937 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 VWA5AO00534 786 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 FDX1P10109 184 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 BMP3P12645 472 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 CYP2B6P20813 491 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 PTPREP23469 700 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 COPB2P35606 906 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 NOVP48745 357 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 PLS1Q14651 629 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
SHMT2-204ENST00000553324 GMCL1Q96IK5 515 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 SLF1Q9BQI6 1058 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 MOV10L1Q9BXT6 1211 aaKnown RBP18.11■□□□□ 0.49
SHMT2-204ENST00000553324 RNF208Q9H0X6 261 aa18.11■□□□□ 0.49
SHMT2-204ENST00000553324 POTEFA5A3E0 1075 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 MYCP01106 439 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-204ENST00000553324 HMGCRP04035 888 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 INHAP05111 366 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 GJB1P08034 283 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 CCL5P13501 91 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 ELNP15502 786 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 SLC1A4P43007 532 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 MAP2K5Q13163 448 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 LRRC47Q8N1G4 583 aaKnown RBP18.1■□□□□ 0.49
SHMT2-204ENST00000553324 CHURC1Q8WUH1 139 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 USP6NLQ92738 828 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 SLC5A4Q9NY91 659 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-204ENST00000553324 TACC3Q9Y6A5 838 aa18.1■□□□□ 0.49
SHMT2-204ENST00000553324 ZBED4O75132 1171 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-204ENST00000553324 ERCC3P19447 782 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 STAT3P40763 770 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 GRB14Q14449 540 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 TMEM132BQ14DG7 1078 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 MTFR1Q15390 333 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 NCAPG2Q86XI2 1143 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 ABRAQ8N0Z2 381 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-204ENST00000553324 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
SHMT2-204ENST00000553324 NMT2O60551 498 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 PLA2G6O60733 806 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 HOXC6P09630 235 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 TOP1P11387 765 aaKnown RBP18.08■□□□□ 0.48
SHMT2-204ENST00000553324 EN2P19622 333 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-204ENST00000553324 STAT2P52630 851 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 RCSD1Q6JBY9 416 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 FAM160B2Q86V87 743 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 IQCA1Q86XH1 822 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 KIFC2Q96AC6 838 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 APBA2Q99767 749 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 KRT23Q9C075 422 aa18.08■□□□□ 0.48
SHMT2-204ENST00000553324 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-204ENST00000553324 BRCA2P51587 3418 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 ATP2A1O14983 1001 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 SGSM2O43147 1006 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 FCER1AP12319 257 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 ZKSCAN1P17029 563 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-204ENST00000553324 MCCP23508 829 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 GJA8P48165 433 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 DGKHQ86XP1 1220 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 TEX13BQ9BXU2 312 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 NBPF3Q9H094 633 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 HMX1Q9NP08 348 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-204ENST00000553324 GREB1LQ9C091 1923 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-204ENST00000553324 MGAMO43451 1857 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 ZSWIM8A7E2V4 1837 aa18.07■□□□□ 0.48
SHMT2-204ENST00000553324 RPTORQ8N122 1335 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 TMEM232C9JQI7 657 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 OAZ1P54368 228 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 TRDNQ13061 729 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-204ENST00000553324 ERICH6BQ5W0A0 696 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms