RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 USP17L11C9JVI0 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L18D6R9N7 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L22D6RA61 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L17D6RBQ6 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L19D6RCP7 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L20D6RJB6 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 GALR2O43603 387 aaPredicted RBP6.44□□□□□ -1.38
CKAP4-203ENST00000553039 GFRA3O60609 400 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 PDE8BO95263 885 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 MAP4K4O95819 1239 aaPredicted RBP6.44□□□□□ -1.38
CKAP4-203ENST00000553039 ASNSP08243 561 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 ACRP10323 421 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 CSF2RAP15509 400 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 CD46P15529 392 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 PLCG2P16885 1265 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L24Q0WX57 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 METTL24Q5JXM2 366 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 ANO1Q5XXA6 986 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 USP17L2Q6R6M4 530 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 POTEBQ6S5H4 581 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 CCDC84Q86UT8 332 aaPredicted RBP6.44□□□□□ -1.38
CKAP4-203ENST00000553039 TRPV1Q8NER1 839 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 DNAAF4Q8WXU2 420 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 RUNDC1Q96C34 613 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 PCGF6Q9BYE7 350 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 CD320Q9NPF0 282 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 XPNPEP3Q9NQH7 507 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 STARD7Q9NQZ5 370 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 FAM50BQ9Y247 325 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 NDUFB9Q9Y6M9 179 aa6.44□□□□□ -1.38
CKAP4-203ENST00000553039 LAMA2P24043 3122 aaKnown RBP6.44□□□□□ -1.38
CKAP4-203ENST00000553039 MOXD2PA6NHM9 499 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 ATMINO43313 823 aaPredicted RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 RGS20O76081 388 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 ZNF853P0CG23 659 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 MTMR2Q13614 643 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 GRB14Q14449 540 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 NBPF20Q3BBV1 942 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 SPTY2D1Q68D10 685 aaPredicted RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 SH3BP5LQ7L8J4 393 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 FOXP4Q8IVH2 680 aaPredicted RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 ZNF710Q8N1W2 664 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 C8orf58Q8NAV2 365 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 NPLOC4Q8TAT6 608 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 FAM163AQ96GL9 167 aaPredicted RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 GLT1D1Q96MS3 346 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 HOXC10Q9NYD6 342 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 C9orf78Q9NZ63 289 aaPredicted RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 HERC5Q9UII4 1024 aaKnown RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 YBX2Q9Y2T7 364 aaKnown RBP6.43□□□□□ -1.38
CKAP4-203ENST00000553039 ELP1O95163 1332 aa6.43□□□□□ -1.38
CKAP4-203ENST00000553039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 A0A1W2PQ45 241 aaPredicted RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 A0A1W2PQY0 241 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PEX10O60683 326 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 IGHA2P01877 340 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 LDHCP07864 332 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 ATP2A2P16615 1042 aaKnown RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 FKBP5Q13451 457 aaPredicted RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PICALMQ13492 652 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 LEXMQ3ZCV2 418 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PRAMEF19Q5SWL8 479 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 OTOP2Q7RTS6 562 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PCSK9Q8NBP7 692 aaKnown RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 SEZ6LQ9BYH1 1024 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 TRIM34Q9BYJ4 488 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PUS3Q9BZE2 481 aaKnown RBP6.42□□□□□ -1.38
CKAP4-203ENST00000553039 SPC25Q9HBM1 224 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 PI4KBQ9UBF8 816 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 TBX21Q9UL17 535 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 DENND2AQ9ULE3 1009 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 KIF16BQ96L93 1317 aa6.42□□□□□ -1.38
CKAP4-203ENST00000553039 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.41□□□□□ -1.38
CKAP4-203ENST00000553039 RFXAPO00287 272 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PGK1P00558 417 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ADORA2AP29274 412 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ID4P47928 161 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 CDK7P50613 346 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ACLYP53396 1101 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 RABGGTBP53611 331 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 USP14P54578 494 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PRSS12P56730 875 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PUM3Q15397 648 aaKnown RBP6.41□□□□□ -1.38
CKAP4-203ENST00000553039 QPCTQ16769 361 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 CCDC27Q2M243 656 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 CATSPERGQ6ZRH7 1159 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 HFE2Q6ZVN8 426 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 SND1Q7KZF4 910 aaKnown RBP eCLIP6.41□□□□□ -1.38
CKAP4-203ENST00000553039 BMP8AQ7Z5Y6 402 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ABRAQ8N0Z2 381 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PHOSPHO2Q8TCD6 241 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 LPIN2Q92539 896 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 DHX36Q9H2U1 1008 aaKnown RBP6.41□□□□□ -1.38
CKAP4-203ENST00000553039 MROH8Q9H579 483 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.41□□□□□ -1.38
CKAP4-203ENST00000553039 PRKAG3Q9UGI9 489 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms