RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 PLCG2P16885 1265 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.474e-6■■□□□ 13.3
TGFBR1-209ENST00000552516 USP17L15C9J2P7 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L13C9JLJ4 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L11C9JVI0 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L18D6R9N7 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L22D6RA61 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L17D6RBQ6 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L19D6RCP7 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L20D6RJB6 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 NEMFO60524 1076 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 ALAS1P13196 640 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L24Q0WX57 530 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L6PQ6QN14 398 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 ZNF277Q9NRM2 450 aaPredicted RBP12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.476e-9■■■□□ 15
TGFBR1-209ENST00000552516 GDAQ9Y2T3 454 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 ADCY7P51828 1080 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC144BQ3MJ40 725 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
TGFBR1-209ENST00000552516 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 CDK8P49336 464 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 ICA1Q05084 483 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 ST3GAL1Q11201 340 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 SV2BQ7L1I2 683 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 ENC1O14682 589 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 DEFB132Q7Z7B7 95 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC150Q8NCX0 1101 aa12.11□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 MMP1P03956 469 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 EAPPQ56P03 285 aaPredicted RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 CEP95Q96GE4 821 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 PAGR1Q9BTK6 254 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 SPATA31A1Q5TZJ5 1347 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 POTEMA6NI47 508 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 CCP110O43303 1012 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC42Q96M95 316 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 LUC7L2Q9Y383 392 aaKnown RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 SMIM23A6NLE4 172 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 CMA1P23946 247 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 PAK1Q13153 545 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 GRAPQ13588 217 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 ERCC6LQ2NKX8 1250 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 RCOR1Q9UKL0 485 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 FAM13AO94988 1023 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC122Q5T0U0 273 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
TGFBR1-209ENST00000552516 AKR1B15C9JRZ8 316 aaPredicted RBP12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 TNIP1Q15025 636 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 ZMYND10O75800 440 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 TAF4BQ92750 862 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 ZNF668Q96K58 619 aaPredicted RBP12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 TMEM47Q9BQJ4 181 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 NTSR2O95665 410 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC175P0C221 793 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
TGFBR1-209ENST00000552516 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 GH2P01242 217 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 PRR5LQ6MZQ0 368 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 TRIM31Q9BZY9 425 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 KIF20AO95235 890 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 GCNT3O95395 438 aa12.08□□□□□ -0.48
TGFBR1-209ENST00000552516 CYP2J2P51589 502 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms